Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL035398.1-201ENST00000430869 322 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 RNU7-45P-201ENST00000459460 63 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 AC026421.1-201ENST00000519101 163 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 AC090821.2-201ENST00000523552 176 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 AC021613.1-201ENST00000623880 111 ntBASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPAS4Q8IUM7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 AC092881.1-201ENST00000638218 2733 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 MIR194-1-201ENST00000384892 85 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 AL022718.1-201ENST00000412004 84 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 HMGN2P19-201ENST00000425149 265 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 RPS23P4-201ENST00000487908 423 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 AP003327.1-201ENST00000529684 127 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 FAM106DP-201ENST00000586416 501 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.51□□□□□ -2.01
NPAS4Q8IUM7 AC005336.3-201ENST00000623833 2679 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-34-201ENST00000362441 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-12-201ENST00000362583 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-29-201ENST00000362834 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-9-201ENST00000362912 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-21-201ENST00000362963 81 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-14-201ENST00000363090 81 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 RNY1P10-201ENST00000363268 113 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-13-201ENST00000363358 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-41-201ENST00000363608 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-11-201ENST00000363616 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.155-201ENST00000363632 101 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-5-201ENST00000363633 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-39-201ENST00000363694 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-4-201ENST00000363810 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-16-201ENST00000363887 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-6-201ENST00000363942 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-42-201ENST00000364273 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-15-201ENST00000364809 81 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-1-201ENST00000364961 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-26-201ENST00000365067 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-10-201ENST00000365073 81 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-43-201ENST00000365503 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-36-201ENST00000365629 82 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 RNU6-820P-201ENST00000384273 107 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.466-201ENST00000384294 113 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.507-201ENST00000384500 99 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 POLR2J4-204ENST00000418424 324 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 RNU6-893P-201ENST00000458841 100 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 RNU2-11P-201ENST00000459191 187 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 RNU7-96P-201ENST00000459535 64 ntBASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS4Q8IUM7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 AL442644.1-201ENST00000454390 3105 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 RNU6-439P-201ENST00000384188 106 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 RNU6-1275P-201ENST00000391087 107 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.601-201ENST00000410500 113 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 RNU6-1258P-201ENST00000516911 111 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
NPAS4Q8IUM7 RNU6-363P-201ENST00000362895 105 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.290-201ENST00000364879 114 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 MIR605-201ENST00000385078 83 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 MIR30A-201ENST00000385092 71 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 MIR577-201ENST00000385196 96 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 AL451046.2-201ENST00000403074 277 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 AL356379.1-201ENST00000414105 126 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 AL591806.2-201ENST00000433122 173 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 RNU7-61P-201ENST00000515897 61 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 RNU6-795P-201ENST00000516323 103 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 MIR514B-201ENST00000516774 80 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 AC015712.3-201ENST00000559380 164 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 AC012531.4-201ENST00000616509 177 ntBASIC2.48□□□□□ -2.01
NPAS4Q8IUM7 WWP1P1-201ENST00000466609 2769 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-19-201ENST00000363098 82 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-18-201ENST00000363293 82 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 RNU6-457P-201ENST00000363999 107 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 RNU4-67P-201ENST00000364569 141 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 SNORD115-17-201ENST00000364612 82 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 Y_RNA.360-201ENST00000365512 102 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 MIR764-201ENST00000390811 85 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 RNU6-733P-201ENST00000410759 104 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 AL161935.2-201ENST00000414627 60 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 AC108210.2-201ENST00000503681 201 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 RNU6-162P-201ENST00000516228 103 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 MIR548Z-201ENST00000584743 97 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 MIR6733-201ENST00000635723 61 ntBASIC2.47□□□□□ -2.01
NPAS4Q8IUM7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 RNU6-832P-201ENST00000363319 107 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 MIR526A1-201ENST00000384897 85 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 RNU6-644P-201ENST00000391155 98 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 Y_RNA.593-201ENST00000410292 98 ntBASIC2.46□□□□□ -2.02
NPAS4Q8IUM7 snoU13.9-201ENST00000458927 103 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms