Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU6-1190P-201ENST00000410811 104 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-165P-201ENST00000517170 99 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 MIR6845-201ENST00000613182 61 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 RNA5SP48-201ENST00000363969 126 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AC009474.2-201ENST00000451383 136 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 RNU7-107P-201ENST00000459121 61 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 IGKV1-22-201ENST00000524313 326 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AC133485.4-201ENST00000561835 220 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AC138907.4-201ENST00000570107 226 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AL020996.3-201ENST00000606617 222 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 AC021613.1-201ENST00000623880 111 ntBASIC1.46□□□□□ -2.18
PTCHD4Q6ZW05 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 SNORD116-14-201ENST00000383894 92 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 SNORD116-17-201ENST00000383929 92 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 SNORD116-15-201ENST00000384445 92 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 Y_RNA.525-201ENST00000384570 113 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 SNORD116-19-201ENST00000384729 92 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 HMGN1P33-201ENST00000432945 451 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 RN7SKP19-201ENST00000516016 252 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 AL365222.1-201ENST00000614661 98 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 AL137067.1-201ENST00000615933 120 ntBASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.45□□□□□ -2.18
PTCHD4Q6ZW05 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 Y_RNA.127-201ENST00000363386 109 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-22P-201ENST00000384355 107 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 SNORA26.6-201ENST00000391256 115 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 Y_RNA.617-201ENST00000410920 90 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-772P-201ENST00000516042 105 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-1333P-201ENST00000516162 93 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-781P-201ENST00000516377 101 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-62P-201ENST00000516526 102 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-1061P-201ENST00000516530 99 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 AC021443.1-201ENST00000604478 211 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 MIR8055-201ENST00000610739 97 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
PTCHD4Q6ZW05 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 Y_RNA.261-201ENST00000364631 102 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-1319P-201ENST00000390855 104 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-747P-201ENST00000390928 104 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-241P-201ENST00000391148 104 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-177P-201ENST00000411257 104 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 AC008267.6-201ENST00000441664 139 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 MIR6717-201ENST00000622747 73 ntBASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PTCHD4Q6ZW05 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 SNORA1.1-201ENST00000364671 133 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 MIR504-201ENST00000385065 83 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 RNA5SP261-201ENST00000410536 106 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 AC090844.1-201ENST00000422019 156 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 AL133373.1-201ENST00000497098 94 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-659P-201ENST00000516454 104 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 CYP3A52P-201ENST00000563326 91 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 MIR4255-201ENST00000579351 72 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 MIR3152-201ENST00000579801 74 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 MIR4305-201ENST00000583252 102 ntBASIC1.42□□□□□ -2.18
PTCHD4Q6ZW05 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 SNORD58C-201ENST00000365223 64 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 MIR1263-201ENST00000408324 86 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 MIR1302-7-201ENST00000408841 72 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 RNA5SP144-201ENST00000410846 116 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 RNU7-164P-201ENST00000459221 62 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 RNU6-295P-201ENST00000516901 104 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 AP000942.3-201ENST00000603702 160 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 MIR502-201ENST00000606349 86 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 Z97988.1-201ENST00000637697 135 ntBASIC1.41□□□□□ -2.18
PTCHD4Q6ZW05 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1168P-201ENST00000390831 104 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1154P-201ENST00000391001 104 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.630-201ENST00000411370 108 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RPS3AP1-201ENST00000413190 320 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 POLR2J4-204ENST00000418424 324 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-479P-201ENST00000516348 105 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RNU2-35P-201ENST00000516446 142 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 RNY4P20-201ENST00000516678 93 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
PTCHD4Q6ZW05 SNORA22.1-201ENST00000362701 134 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.298-201ENST00000364960 107 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 SNORA22C-201ENST00000384614 134 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 RNU2-51P-201ENST00000410708 197 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms