Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-47P-201ENST00000383866 107 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 SNORA51.10-201ENST00000384418 136 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.494-201ENST00000384432 111 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.515-201ENST00000384535 112 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.8□□□□□ -2.28
ZNF544Q6NX49 AF228730.3-201ENST00000436691 102 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 AL121914.1-201ENST00000450188 156 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 RNU7-21P-201ENST00000459430 62 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 RNU6-388P-201ENST00000517012 105 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 RNU6-389P-201ENST00000517048 105 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 AC243994.1-201ENST00000618627 109 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 AC078938.1-201ENST00000620993 318 ntBASIC0.8□□□□□ -2.28
ZNF544Q6NX49 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.8□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.182-201ENST00000363880 111 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.233-201ENST00000364407 101 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.241-201ENST00000364470 117 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 RNU6-643P-201ENST00000384018 107 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORD77.3-201ENST00000391113 65 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORA75.2-201ENST00000391138 150 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORA75.3-201ENST00000391231 150 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF544Q6NX49 RNU7-73P-201ENST00000458743 63 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.644-201ENST00000459006 113 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 AC107297.1-201ENST00000459991 176 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.674-201ENST00000516362 113 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORD116-25-201ENST00000516517 92 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SNORD36C-201ENST00000516733 66 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.79□□□□□ -2.28
ZNF544Q6NX49 MIR378D2-201ENST00000580636 98 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 RMST_2.1-201ENST00000617263 136 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 SEPT14P17-201ENST00000617978 177 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 MTND1P7-201ENST00000632801 297 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 U6.106-201ENST00000636360 105 ntBASIC0.79□□□□□ -2.28
ZNF544Q6NX49 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF544Q6NX49 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.257-201ENST00000364596 102 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.297-201ENST00000364950 91 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 RNU6-1189P-201ENST00000383958 107 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.440-201ENST00000384120 114 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 Y_RNA.785-201ENST00000384290 109 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 SNORA27-201ENST00000384323 126 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 AL138752.1-201ENST00000452964 351 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 snoU13.16-201ENST00000459350 104 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 RPS29P24-201ENST00000486345 171 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 RNU6-138P-201ENST00000515952 107 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 MIR4431-201ENST00000579990 94 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 MIR5197-201ENST00000583721 112 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 AC072026.1-201ENST00000605023 201 ntBASIC0.78□□□□□ -2.28
ZNF544Q6NX49 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF544Q6NX49 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 SNORA25.3-201ENST00000363205 127 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU6-597P-201ENST00000365620 102 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 MT-TN-201ENST00000387400 73 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU6-613P-201ENST00000410412 108 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 AC002429.1-201ENST00000437672 148 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU7-120P-201ENST00000459334 63 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU7-96P-201ENST00000459535 64 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 RNU6-998P-201ENST00000515894 101 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 MIR548AO-201ENST00000579992 96 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 MIR376A2-201ENST00000636782 80 ntBASIC0.77□□□□□ -2.29
ZNF544Q6NX49 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ZNF544Q6NX49 MIR377-201ENST00000362145 69 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 MIR489-201ENST00000384923 84 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 MIR624-201ENST00000385217 97 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 POLR2J4-204ENST00000418424 324 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 RNU7-53P-201ENST00000516705 60 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 MIR8055-201ENST00000610739 97 ntBASIC0.76□□□□□ -2.29
ZNF544Q6NX49 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.75□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.240-201ENST00000364469 95 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 RNU6-1219P-201ENST00000516143 112 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 MIR2115-201ENST00000516657 100 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 MIR3129-201ENST00000581095 76 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 MIR6516-201ENST00000630554 81 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 Z97988.1-201ENST00000637697 135 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.29-201ENST00000362570 113 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 RNU6-580P-201ENST00000365159 107 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 RNU6-396P-201ENST00000365369 105 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 RNA5SP127-201ENST00000411051 133 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 Y_RNA.793-201ENST00000411222 111 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 SCARNA15-202ENST00000516881 127 ntBASIC0.74□□□□□ -2.29
ZNF544Q6NX49 AP002392.1-201ENST00000537692 208 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms