Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORA31.10-201ENST00000516482 106 ntBASIC3.26□□□□□ -1.89
RC3H1Q5TC82 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RC3H1Q5TC82 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RC3H1Q5TC82 AP006437.1-201ENST00000641440 3685 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RC3H1Q5TC82 MIR627-201ENST00000384979 97 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 RNU6-913P-201ENST00000390913 95 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 U8.16-201ENST00000391279 133 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 RNA5SP492-201ENST00000411330 114 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 AL356320.1-201ENST00000429616 163 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 AL513043.2-201ENST00000573941 143 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 MIR3169-201ENST00000578032 83 ntBASIC3.25□□□□□ -1.89
RC3H1Q5TC82 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RC3H1Q5TC82 SNORA11.4-201ENST00000408823 129 ntBASIC3.24□□□□□ -1.89
RC3H1Q5TC82 snoU13.23-201ENST00000458863 104 ntBASIC3.24□□□□□ -1.89
RC3H1Q5TC82 RNU7-35P-201ENST00000517174 62 ntBASIC3.24□□□□□ -1.89
RC3H1Q5TC82 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.24□□□□□ -1.89
RC3H1Q5TC82 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RC3H1Q5TC82 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.24□□□□□ -1.89
RC3H1Q5TC82 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RC3H1Q5TC82 RNU6-342P-201ENST00000384521 104 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 MIR516B2-201ENST00000385190 85 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 AL359511.1-201ENST00000402970 211 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
RC3H1Q5TC82 SPINT5P-201ENST00000448174 155 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.23□□□□□ -1.89
RC3H1Q5TC82 U4atac.1-201ENST00000618345 95 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.23□□□□□ -1.89
RC3H1Q5TC82 AC093831.2-201ENST00000624393 3427 ntBASIC3.23□□□□□ -1.89
RC3H1Q5TC82 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RC3H1Q5TC82 Y_RNA.173-201ENST00000363776 113 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 RNU6-865P-201ENST00000364772 107 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 RNU6-129P-201ENST00000391022 107 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 AC004223.1-201ENST00000479840 271 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 RNA5SP168-201ENST00000516642 112 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 AC243994.1-201ENST00000618627 109 ntBASIC3.22□□□□□ -1.89
RC3H1Q5TC82 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.22□□□□□ -1.89
RC3H1Q5TC82 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RC3H1Q5TC82 Y_RNA.448-201ENST00000384185 108 ntBASIC3.21□□□□□ -1.9
RC3H1Q5TC82 AL034345.1-201ENST00000407768 123 ntBASIC3.21□□□□□ -1.9
RC3H1Q5TC82 RNU7-12P-201ENST00000516030 62 ntBASIC3.21□□□□□ -1.9
RC3H1Q5TC82 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.21□□□□□ -1.9
RC3H1Q5TC82 AC022513.1-201ENST00000624512 117 ntBASIC3.21□□□□□ -1.9
RC3H1Q5TC82 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RC3H1Q5TC82 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RC3H1Q5TC82 RNU6-23P-201ENST00000363283 107 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 MIR181B2-201ENST00000385004 89 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 MIR452-201ENST00000385020 85 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 MIR136-201ENST00000385207 82 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 RNU6-220P-201ENST00000390919 107 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 AC245047.7-201ENST00000440265 293 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 RNU6-523P-201ENST00000516304 54 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 MIR1273D-201ENST00000577266 86 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 AC020891.4-201ENST00000605745 93 ntBASIC3.2□□□□□ -1.9
RC3H1Q5TC82 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.2□□□□□ -1.9
RC3H1Q5TC82 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RC3H1Q5TC82 AC016717.2-201ENST00000609089 5141 ntBASIC3.19□□□□□ -1.9
RC3H1Q5TC82 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RC3H1Q5TC82 RNU6-1094P-201ENST00000362416 104 ntBASIC3.19□□□□□ -1.9
RC3H1Q5TC82 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RC3H1Q5TC82 RNU7-153P-201ENST00000516455 62 ntBASIC3.19□□□□□ -1.9
RC3H1Q5TC82 SNORD67.1-201ENST00000516618 108 ntBASIC3.19□□□□□ -1.9
RC3H1Q5TC82 MIR548AR-201ENST00000582191 57 ntBASIC3.19□□□□□ -1.9
RC3H1Q5TC82 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RC3H1Q5TC82 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RC3H1Q5TC82 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RC3H1Q5TC82 RNU6-478P-201ENST00000363904 110 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 RNU6-480P-201ENST00000384332 107 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 SNORD38.2-201ENST00000384470 69 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 AC092427.1-202ENST00000430569 476 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 HSPE1P9-201ENST00000440046 311 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 AC234781.5-201ENST00000508429 271 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 SNORA25.13-201ENST00000516395 103 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 AC015712.3-201ENST00000559380 164 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 AC012676.2-201ENST00000619258 186 ntBASIC3.18□□□□□ -1.9
RC3H1Q5TC82 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RC3H1Q5TC82 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RC3H1Q5TC82 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RC3H1Q5TC82 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RC3H1Q5TC82 Y_RNA.57-201ENST00000362806 113 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 RNU6-1019P-201ENST00000364424 107 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 RNA5SP138-201ENST00000365098 114 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 RNU6-1321P-201ENST00000390905 107 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 SNORD28B-201ENST00000390993 75 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 RNU6-519P-201ENST00000410590 108 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.17□□□□□ -1.9
RC3H1Q5TC82 HMGN1P33-201ENST00000432945 451 ntBASIC3.17□□□□□ -1.9
RC3H1Q5TC82 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.17□□□□□ -1.9
RC3H1Q5TC82 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RC3H1Q5TC82 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RC3H1Q5TC82 RNA5SP456-201ENST00000364002 114 ntBASIC3.16□□□□□ -1.9
RC3H1Q5TC82 SNORD114-30-201ENST00000364448 72 ntBASIC3.16□□□□□ -1.9
RC3H1Q5TC82 MIR1236-201ENST00000408340 102 ntBASIC3.16□□□□□ -1.9
RC3H1Q5TC82 RNU6-447P-201ENST00000410293 104 ntBASIC3.16□□□□□ -1.9
RC3H1Q5TC82 RNU6-1118P-201ENST00000410382 104 ntBASIC3.16□□□□□ -1.9
RC3H1Q5TC82 RNU6-1076P-201ENST00000410397 104 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms