Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU2-11P-201ENST00000459191 187 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 snoU13.18-201ENST00000459483 104 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 RNU6-998P-201ENST00000515894 101 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 RNU6-504P-201ENST00000516568 104 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 AL356055.1-201ENST00000602528 446 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 AC097639.2-201ENST00000603159 172 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 MIR6515-201ENST00000619843 57 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 MIR30D-201ENST00000362283 70 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 Y_RNA.44-201ENST00000362676 108 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 Y_RNA.202-201ENST00000364083 110 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 SNORA1.1-201ENST00000364671 133 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 SNORA1-201ENST00000384107 130 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 RNU6-1228P-201ENST00000391014 107 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 SNORA26-201ENST00000391286 122 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 MIR938-201ENST00000401216 83 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 MIR18B-201ENST00000454574 71 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 RNU7-185P-201ENST00000459215 60 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 RNU7-96P-201ENST00000459535 64 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 RNU6-1299P-201ENST00000516316 100 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 Y_RNA.701-201ENST00000516812 110 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.33□□□□□ -2.36
RFX4Q33E94 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
RFX4Q33E94 Y_RNA.23-201ENST00000362496 106 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 Y_RNA.304-201ENST00000365011 112 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 Y_RNA.354-201ENST00000365448 111 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 MIR125B2-201ENST00000385128 89 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 SNORD77.3-201ENST00000391113 65 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 SNORA26.6-201ENST00000391256 115 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 RNU2-55P-201ENST00000411146 174 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 AC113618.1-201ENST00000416747 285 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 RNU7-102P-201ENST00000458948 62 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 RNU7-45P-201ENST00000459460 63 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 RNU6-1153P-201ENST00000516760 105 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.32□□□□□ -2.36
RFX4Q33E94 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
RFX4Q33E94 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
RFX4Q33E94 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.82-201ENST00000363000 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.92-201ENST00000363043 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 RNU6-797P-201ENST00000363101 109 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.235-201ENST00000364412 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.306-201ENST00000365015 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.312-201ENST00000365089 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.322-201ENST00000365151 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 RNU6-1189P-201ENST00000383958 107 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.432-201ENST00000384087 111 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 RNU6-1109P-201ENST00000391187 107 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 AL606845.1-201ENST00000404881 255 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.604-201ENST00000410574 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 RNU2-70P-201ENST00000410718 179 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.650-201ENST00000459002 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 TRBVB-201ENST00000477100 408 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.31□□□□□ -2.36
RFX4Q33E94 RNU6-561P-201ENST00000516222 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 RNA5SP153-201ENST00000516498 76 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.777-201ENST00000516982 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 AC090897.1-201ENST00000580909 226 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.771-201ENST00000598668 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 U2.14-201ENST00000615943 113 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 Y_RNA.789-201ENST00000622480 102 ntBASIC0.31□□□□□ -2.36
RFX4Q33E94 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 Y_RNA.355-201ENST00000365462 98 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 RNU6-597P-201ENST00000365620 102 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 Y_RNA.410-201ENST00000383992 113 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 MIR616-201ENST00000385293 97 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 MIR4711-201ENST00000578274 70 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 SNORD92-201ENST00000585078 85 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 MIR6717-201ENST00000622747 73 ntBASIC0.3□□□□□ -2.36
RFX4Q33E94 RNU6-639P-201ENST00000384074 107 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 RNY3P5-201ENST00000384127 102 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 Y_RNA.508-201ENST00000384502 114 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 MT-TW-201ENST00000387382 68 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 RNU6-381P-201ENST00000391259 108 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 MIR1257-201ENST00000408490 117 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
RFX4Q33E94 MTATP8P1-201ENST00000467115 207 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 AL442663.2-201ENST00000554385 511 ntBASIC0.29□□□□□ -2.36
RFX4Q33E94 RNU6-653P-201ENST00000363074 106 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 Y_RNA.483-201ENST00000384380 101 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 RNU6-364P-201ENST00000384387 107 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 MIR598-201ENST00000384868 97 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.28□□□□□ -2.36
RFX4Q33E94 MIR4282-201ENST00000583613 67 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
RFX4Q33E94 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms