Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR7-2-201ENST00000384970 110 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 MIR563-201ENST00000385080 79 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.35□□□□□ -2.35
SMARCB1Q12824 RNU6-453P-201ENST00000516819 85 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 RNU6-365P-201ENST00000517113 106 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 AC006006.1-201ENST00000603082 144 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 AC037487.3-201ENST00000606668 112 ntBASIC0.35□□□□□ -2.35
SMARCB1Q12824 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 Y_RNA.634-201ENST00000364811 113 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SMARCB1Q12824 SNORA1-201ENST00000384107 130 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 SNORA8.3-201ENST00000384679 139 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 SNORD38B-201ENST00000384690 67 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 MIR588-201ENST00000384900 83 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 RNU6-1165P-201ENST00000410119 107 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.34□□□□□ -2.36
SMARCB1Q12824 RNU2-11P-201ENST00000459191 187 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 AC097639.2-201ENST00000603159 172 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 Z83818.1-201ENST00000603584 150 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 SNORD38B-202ENST00000625943 69 ntBASIC0.34□□□□□ -2.36
SMARCB1Q12824 Y_RNA.23-201ENST00000362496 106 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RNU6-597P-201ENST00000365620 102 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 Y_RNA.440-201ENST00000384120 114 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RNU6-1228P-201ENST00000391014 107 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 SNORA26.6-201ENST00000391256 115 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 MIR548I3-201ENST00000408378 149 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RNU6-985P-201ENST00000410182 104 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 SNORD2.1-201ENST00000458762 69 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 snoU13.2-201ENST00000459201 104 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RNU6-998P-201ENST00000515894 101 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 RN7SKP12-201ENST00000516275 143 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 MIR5688-201ENST00000580619 83 ntBASIC0.33□□□□□ -2.36
SMARCB1Q12824 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.33□□□□□ -2.36
SMARCB1Q12824 MIR30D-201ENST00000362283 70 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 Y_RNA.237-201ENST00000364439 102 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 SNORA33.2-201ENST00000365413 134 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 SNORD77.3-201ENST00000391113 65 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 Y_RNA.622-201ENST00000411091 108 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 AC113618.1-201ENST00000416747 285 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU7-102P-201ENST00000458948 62 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU7-185P-201ENST00000459215 60 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU7-45P-201ENST00000459460 63 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU6-1143P-201ENST00000516125 104 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU6-561P-201ENST00000516222 102 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU7-53P-201ENST00000516705 60 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 RNU6-1153P-201ENST00000516760 105 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.32□□□□□ -2.36
SMARCB1Q12824 AL356055.1-201ENST00000602528 446 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 MIR6779-201ENST00000617283 64 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 MIR924-201ENST00000638017 53 ntBASIC0.32□□□□□ -2.36
SMARCB1Q12824 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 SNORA1.1-201ENST00000364671 133 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 Y_RNA.304-201ENST00000365011 112 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 MIR125B2-201ENST00000385128 89 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 MIR18B-201ENST00000454574 71 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 RNU7-96P-201ENST00000459535 64 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 RNU6-504P-201ENST00000516568 104 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 Y_RNA.701-201ENST00000516812 110 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
SMARCB1Q12824 AC090897.1-201ENST00000580909 226 ntBASIC0.31□□□□□ -2.36
SMARCB1Q12824 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 Y_RNA.44-201ENST00000362676 108 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 Y_RNA.205-201ENST00000364128 113 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 SNORA63C-201ENST00000364578 129 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 SNORD100-201ENST00000408573 76 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 RNU6-1299P-201ENST00000516316 100 ntBASIC0.3□□□□□ -2.36
SMARCB1Q12824 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 MIR342-201ENST00000362212 99 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.7-201ENST00000362352 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.82-201ENST00000363000 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.92-201ENST00000363043 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.235-201ENST00000364412 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.306-201ENST00000365015 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.312-201ENST00000365089 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.322-201ENST00000365151 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.432-201ENST00000384087 111 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 RNU6-1109P-201ENST00000391187 107 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 AL606845.1-201ENST00000404881 255 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.650-201ENST00000459002 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 MTATP8P1-201ENST00000467115 207 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 TRBVB-201ENST00000477100 408 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.777-201ENST00000516982 102 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.29□□□□□ -2.36
SMARCB1Q12824 SNORD92-201ENST00000585078 85 ntBASIC0.29□□□□□ -2.36
SMARCB1Q12824 Y_RNA.771-201ENST00000598668 102 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms