Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP46P62068 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
USP46P62068 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
USP46P62068 SNORD114-10-201ENST00000363409 72 ntBASIC3.06□□□□□ -1.92
USP46P62068 RNU7-48P-201ENST00000458875 63 ntBASIC3.06□□□□□ -1.92
USP46P62068 AC012676.2-201ENST00000619258 186 ntBASIC3.06□□□□□ -1.92
USP46P62068 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP46P62068 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
USP46P62068 Y_RNA.510-201ENST00000384511 114 ntBASIC3.05□□□□□ -1.92
USP46P62068 RNU6-65P-201ENST00000516332 98 ntBASIC3.05□□□□□ -1.92
USP46P62068 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
USP46P62068 AC108206.1-201ENST00000570186 4159 ntBASIC3.05□□□□□ -1.92
USP46P62068 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP46P62068 Y_RNA.98-201ENST00000363109 102 ntBASIC3.04□□□□□ -1.92
USP46P62068 SNORD115-27-201ENST00000364430 82 ntBASIC3.04□□□□□ -1.92
USP46P62068 Y_RNA.316-201ENST00000365118 111 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-447P-201ENST00000410293 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-1118P-201ENST00000410382 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-1076P-201ENST00000410397 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-355P-201ENST00000410427 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-791P-201ENST00000410467 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-705P-201ENST00000410601 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-1100P-201ENST00000410691 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-860P-201ENST00000410860 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-1217P-201ENST00000411276 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RNU6-785P-201ENST00000411324 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
USP46P62068 AC079600.2-201ENST00000550076 130 ntBASIC3.04□□□□□ -1.92
USP46P62068 U6.90-201ENST00000614007 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 U6.70-201ENST00000620287 104 ntBASIC3.04□□□□□ -1.92
USP46P62068 MIR6852-201ENST00000621699 66 ntBASIC3.04□□□□□ -1.92
USP46P62068 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
USP46P62068 AC027119.1-201ENST00000440877 241 ntBASIC3.03□□□□□ -1.92
USP46P62068 RNU6-917P-201ENST00000516294 104 ntBASIC3.03□□□□□ -1.92
USP46P62068 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.03□□□□□ -1.92
USP46P62068 GTF3AP2-201ENST00000557014 266 ntBASIC3.03□□□□□ -1.92
USP46P62068 AL513043.2-201ENST00000573941 143 ntBASIC3.03□□□□□ -1.92
USP46P62068 MIR548AO-201ENST00000579992 96 ntBASIC3.03□□□□□ -1.92
USP46P62068 AC006023.1-201ENST00000603944 259 ntBASIC3.03□□□□□ -1.92
USP46P62068 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP46P62068 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP46P62068 SNORA5B-201ENST00000363786 132 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNU6-776P-201ENST00000364403 104 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNU6-1022P-201ENST00000365049 104 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNU1-51P-201ENST00000365345 176 ntBASIC3.02□□□□□ -1.93
USP46P62068 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNU1-138P-201ENST00000384093 164 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
USP46P62068 MIR181B2-201ENST00000385004 89 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNA5SP237-201ENST00000410414 113 ntBASIC3.02□□□□□ -1.93
USP46P62068 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
USP46P62068 AL161932.1-201ENST00000437408 146 ntBASIC3.02□□□□□ -1.93
USP46P62068 AC011753.1-201ENST00000451001 220 ntBASIC3.02□□□□□ -1.93
USP46P62068 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.02□□□□□ -1.93
USP46P62068 SNORD14A-201ENST00000606526 91 ntBASIC3.02□□□□□ -1.93
USP46P62068 U1.36-201ENST00000620684 176 ntBASIC3.02□□□□□ -1.93
USP46P62068 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP46P62068 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USP46P62068 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
USP46P62068 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
USP46P62068 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USP46P62068 RNU6-524P-201ENST00000384270 107 ntBASIC3.01□□□□□ -1.93
USP46P62068 SNORD38B-201ENST00000384690 67 ntBASIC3.01□□□□□ -1.93
USP46P62068 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.01□□□□□ -1.93
USP46P62068 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
USP46P62068 AP001362.1-201ENST00000625165 124 ntBASIC3.01□□□□□ -1.93
USP46P62068 SNORD38B-202ENST00000625943 69 ntBASIC3.01□□□□□ -1.93
USP46P62068 MIR4251-201ENST00000635819 61 ntBASIC3.01□□□□□ -1.93
USP46P62068 AC131280.1-202ENST00000624067 4211 ntBASIC3.01□□□□□ -1.93
USP46P62068 MIR519C-201ENST00000385053 87 ntBASIC3□□□□□ -1.93
USP46P62068 AC019129.1-201ENST00000403786 261 ntBASIC3□□□□□ -1.93
USP46P62068 RNA5SP356-201ENST00000515972 94 ntBASIC3□□□□□ -1.93
USP46P62068 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3□□□□□ -1.93
USP46P62068 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP46P62068 Y_RNA.173-201ENST00000363776 113 ntBASIC2.99□□□□□ -1.93
USP46P62068 RNY1P13-201ENST00000365030 105 ntBASIC2.99□□□□□ -1.93
USP46P62068 RNU6-480P-201ENST00000384332 107 ntBASIC2.99□□□□□ -1.93
USP46P62068 MIR889-201ENST00000401280 79 ntBASIC2.99□□□□□ -1.93
USP46P62068 RNU6-613P-201ENST00000410412 108 ntBASIC2.99□□□□□ -1.93
USP46P62068 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
USP46P62068 DEFB122-202ENST00000569013 197 ntBASIC2.99□□□□□ -1.93
USP46P62068 AC020891.4-201ENST00000605745 93 ntBASIC2.99□□□□□ -1.93
USP46P62068 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
USP46P62068 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP46P62068 SNORD115-37-201ENST00000363768 82 ntBASIC2.98□□□□□ -1.93
USP46P62068 AC087499.2-201ENST00000432861 149 ntBASIC2.98□□□□□ -1.93
USP46P62068 AC108938.1-201ENST00000451204 136 ntBASIC2.98□□□□□ -1.93
USP46P62068 AC133485.1-201ENST00000567176 124 ntBASIC2.98□□□□□ -1.93
USP46P62068 MIR3935-201ENST00000583472 104 ntBASIC2.98□□□□□ -1.93
USP46P62068 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP46P62068 Y_RNA.168-201ENST00000363740 102 ntBASIC2.97□□□□□ -1.93
USP46P62068 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
USP46P62068 RNA5SP100-201ENST00000410903 110 ntBASIC2.97□□□□□ -1.93
USP46P62068 RNA5SP59-201ENST00000410922 110 ntBASIC2.97□□□□□ -1.93
USP46P62068 AC073261.1-201ENST00000429409 121 ntBASIC2.97□□□□□ -1.93
USP46P62068 AC093729.1-201ENST00000513074 128 ntBASIC2.97□□□□□ -1.93
USP46P62068 SNORA31.17-201ENST00000516953 127 ntBASIC2.97□□□□□ -1.93
USP46P62068 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.97□□□□□ -1.93
USP46P62068 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms