Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RNA5SP169-201ENST00000517268 117 ntBASIC-1.04□□□□□ -2.58
AP3S2P59780 RNU6-259P-201ENST00000383999 107 ntBASIC-1.05□□□□□ -2.58
AP3S2P59780 SNORA18-201ENST00000384416 132 ntBASIC-1.05□□□□□ -2.58
AP3S2P59780 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
AP3S2P59780 RNU7-188P-201ENST00000517063 64 ntBASIC-1.05□□□□□ -2.58
AP3S2P59780 AL021707.8-201ENST00000609428 183 ntBASIC-1.05□□□□□ -2.58
AP3S2P59780 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.05□□□□□ -2.58
AP3S2P59780 SNORD114-14-201ENST00000362723 75 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 RNU6-865P-201ENST00000364772 107 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 AL160004.2-201ENST00000432935 350 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 RPS3AP52-201ENST00000435639 297 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.06□□□□□ -2.58
AP3S2P59780 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 RNU6-415P-201ENST00000516252 97 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 AC100767.1-201ENST00000528178 123 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 U6.92-201ENST00000636464 89 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 U6.109-201ENST00000636749 87 ntBASIC-1.06□□□□□ -2.58
AP3S2P59780 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 RNU6-35P-201ENST00000384530 107 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.07□□□□□ -2.58
AP3S2P59780 SNORD77.4-201ENST00000516158 81 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 MIR4473-201ENST00000583731 91 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 AC005899.2-201ENST00000584353 90 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.07□□□□□ -2.58
AP3S2P59780 AC090582.1-201ENST00000636321 199 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 TPTEP1-208ENST00000636884 213 ntBASIC-1.07□□□□□ -2.58
AP3S2P59780 RNU6-888P-201ENST00000363010 101 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 RNU6-509P-201ENST00000363519 107 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 RNU6-593P-201ENST00000364716 112 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 SNORD24-201ENST00000383884 75 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 MIR548F5-201ENST00000408421 86 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 MIR4423-201ENST00000580922 80 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 MIR1321-201ENST00000637766 79 ntBASIC-1.08□□□□□ -2.58
AP3S2P59780 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 RNU6-47P-201ENST00000383866 107 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 RNU6-455P-201ENST00000384681 107 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
AP3S2P59780 RNU2-66P-201ENST00000410650 161 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 RNU6-373P-201ENST00000411247 98 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.09□□□□□ -2.58
AP3S2P59780 AP001328.1-201ENST00000528550 176 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 PISRT1.1-201ENST00000616930 107 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 AC093726.3-201ENST00000637588 150 ntBASIC-1.09□□□□□ -2.58
AP3S2P59780 RNU4-80P-201ENST00000363200 141 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 MTND2P9-201ENST00000422293 931 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 AL445193.1-201ENST00000441183 141 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 RNU6-307P-201ENST00000516743 106 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 RNU7-110P-201ENST00000516891 62 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 RNU6-365P-201ENST00000517113 106 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 MIR4662B-201ENST00000579498 81 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 MIR3681-201ENST00000580089 72 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.1□□□□□ -2.59
AP3S2P59780 AC099654.14-201ENST00000638599 341 ntBASIC-1.1□□□□□ -2.59
AP3S2P59780 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 MTATP6P23-201ENST00000440153 476 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 MIR3611-201ENST00000584484 83 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 AC063944.3-201ENST00000609969 533 ntBASIC-1.11□□□□□ -2.59
AP3S2P59780 SNORA22.1-201ENST00000362701 134 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 RNU6-899P-201ENST00000363947 107 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 SNORA20-201ENST00000384662 132 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.12□□□□□ -2.59
AP3S2P59780 MIR6841-201ENST00000637129 72 ntBASIC-1.12□□□□□ -2.59
AP3S2P59780 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 MIR628-201ENST00000385229 95 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 MIR548K-201ENST00000408406 116 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 RNA5SP25-201ENST00000410815 110 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
AP3S2P59780 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.13□□□□□ -2.59
AP3S2P59780 AC091932.4-201ENST00000623386 200 ntBASIC-1.13□□□□□ -2.59
AP3S2P59780 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 MIR204-201ENST00000385200 110 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 AC144568.1-201ENST00000520139 137 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
AP3S2P59780 AC145350.1-201ENST00000567426 208 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 MIR376A2-201ENST00000636782 80 ntBASIC-1.14□□□□□ -2.59
AP3S2P59780 RNY1P2-201ENST00000364820 117 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 RNU6-144P-201ENST00000383951 107 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 RNU7-79P-201ENST00000516082 62 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 RNU6-397P-201ENST00000516226 104 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 MIR548AX-201ENST00000580117 73 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms