Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-109P-201ENST00000516364 107 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-184P-201ENST00000516514 107 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU7-53P-201ENST00000516705 60 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-958P-201ENST00000516995 106 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 Y_RNA.818-201ENST00000618813 71 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 AC087741.2-201ENST00000619415 172 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 SNORD3E-202ENST00000627253 216 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 SNORA16B-201ENST00000364674 135 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 SNORA24-201ENST00000384096 131 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RNU6-893P-201ENST00000458841 100 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 SNORD123-201ENST00000459473 70 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RNU2-13P-201ENST00000515909 113 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RNU6-904P-201ENST00000516206 101 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 RNU6-970P-201ENST00000516312 107 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 AC095038.3-201ENST00000634439 195 ntBASIC2.1□□□□□ -2.07
ITGA1P56199 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ITGA1P56199 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 SNORD115-19-201ENST00000363098 82 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 SNORD115-18-201ENST00000363293 82 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 SNORD115-17-201ENST00000364612 82 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 Y_RNA.299-201ENST00000364973 94 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 SNORD28B-201ENST00000390993 75 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 RNU7-113P-201ENST00000459273 62 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
ITGA1P56199 MIR3152-201ENST00000579801 74 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 MIR3618-201ENST00000580330 88 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 MIR548AR-201ENST00000582191 57 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
ITGA1P56199 Y_RNA.171-201ENST00000363760 102 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 RNA5SP261-201ENST00000410536 106 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 AC113410.1-201ENST00000505029 247 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 DNAJC19P9-201ENST00000555084 351 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 AL513534.2-201ENST00000603836 250 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 AC243994.1-201ENST00000618627 109 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 MIR6841-201ENST00000637129 72 ntBASIC2.08□□□□□ -2.08
ITGA1P56199 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
ITGA1P56199 SNORA22.1-201ENST00000362701 134 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 RNU6-1131P-201ENST00000364955 107 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 Y_RNA.507-201ENST00000384500 99 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 SNORA26.6-201ENST00000391256 115 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 RNU4-69P-201ENST00000410677 143 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 RNU7-73P-201ENST00000458743 63 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 RNU6-1258P-201ENST00000516911 111 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 RNU6-158P-201ENST00000517104 100 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 MIR4791-201ENST00000607666 84 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ITGA1P56199 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
ITGA1P56199 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
ITGA1P56199 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
ITGA1P56199 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 FAM106DP-201ENST00000586416 501 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 MIR1255B1-201ENST00000636325 63 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.06□□□□□ -2.08
ITGA1P56199 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
ITGA1P56199 SNORD115-2-201ENST00000362842 82 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 RNU4-36P-201ENST00000364294 144 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 RNU6-294P-201ENST00000364999 102 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 SNORD115-20-201ENST00000365099 82 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 RNU6-49P-201ENST00000384256 107 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 RNU6-913P-201ENST00000390913 95 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 RNU6-1190P-201ENST00000410811 104 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 AL020996.3-201ENST00000606617 222 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 Y_RNA.773-201ENST00000607168 90 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 MIR6717-201ENST00000622747 73 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 MIR2052-201ENST00000636055 55 ntBASIC2.05□□□□□ -2.08
ITGA1P56199 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
ITGA1P56199 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 Y_RNA.155-201ENST00000363632 101 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 MIR488-201ENST00000365739 83 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 Y_RNA.430-201ENST00000384081 110 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 Y_RNA.470-201ENST00000384307 117 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 Y_RNA.537-201ENST00000384626 109 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 RNU6-1067P-201ENST00000384752 107 ntBASIC2.04□□□□□ -2.08
ITGA1P56199 MIR1302-4-201ENST00000408701 150 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms