Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.95□□□□□ -2.1
GFRA1P56159 AL391516.1-201ENST00000554380 2449 ntBASIC1.95□□□□□ -2.1
GFRA1P56159 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 Y_RNA.531-201ENST00000384589 121 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 RNY4P18-201ENST00000391107 89 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 AC079140.2-201ENST00000506193 142 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 AC022523.2-201ENST00000561045 150 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 MIR6841-201ENST00000637129 72 ntBASIC1.94□□□□□ -2.1
GFRA1P56159 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
GFRA1P56159 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
GFRA1P56159 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
GFRA1P56159 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
GFRA1P56159 AL512326.2-201ENST00000426359 151 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 HMGN1P33-201ENST00000432945 451 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 RPL39P39-201ENST00000455840 151 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 IGKV3-31-201ENST00000523109 329 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 CYP3A52P-201ENST00000563326 91 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
GFRA1P56159 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
GFRA1P56159 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
GFRA1P56159 Y_RNA.299-201ENST00000364973 94 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 Y_RNA.354-201ENST00000365448 111 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 AC063976.4-201ENST00000421971 163 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 AC019176.1-201ENST00000518519 225 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 MIR8055-201ENST00000610739 97 ntBASIC1.92□□□□□ -2.1
GFRA1P56159 MIR302D-201ENST00000362275 68 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 Y_RNA.171-201ENST00000363760 102 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 SNORA22-201ENST00000383907 134 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 RNU6-1104P-201ENST00000384723 104 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 RPS23P4-201ENST00000487908 423 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 AC113410.1-201ENST00000505029 247 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 MIR4679-2-201ENST00000578358 77 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 MIR548AO-201ENST00000579992 96 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 MIR3937-201ENST00000580135 106 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 Z97988.1-201ENST00000637697 135 ntBASIC1.91□□□□□ -2.1
GFRA1P56159 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
GFRA1P56159 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GFRA1P56159 SNORD12C-201ENST00000386307 89 ntBASIC1.9□□□□□ -2.11
GFRA1P56159 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.9□□□□□ -2.11
GFRA1P56159 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
GFRA1P56159 RNU6-947P-201ENST00000516264 106 ntBASIC1.9□□□□□ -2.11
GFRA1P56159 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
GFRA1P56159 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
GFRA1P56159 AL589743.1-201ENST00000551932 2712 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 Y_RNA.281-201ENST00000364774 94 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 MIR548D2-201ENST00000384955 97 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 MT-TI-201ENST00000387365 69 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 RPL30P7-201ENST00000479312 323 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 AC104435.1-201ENST00000483483 166 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 RNA5SP33-201ENST00000516687 98 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 RNU7-6P-201ENST00000516845 62 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 MIR5002-201ENST00000584713 97 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 AC104984.5-201ENST00000586878 94 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 AL096861.1-201ENST00000610899 123 ntBASIC1.89□□□□□ -2.11
GFRA1P56159 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
GFRA1P56159 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 SNORD115-2-201ENST00000362842 82 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 SNORD115-20-201ENST00000365099 82 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 Y_RNA.362-201ENST00000365518 110 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 PDCD5P2-201ENST00000507570 312 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 MIR514B-201ENST00000516774 80 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 RNU6-1258P-201ENST00000516911 111 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
GFRA1P56159 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
GFRA1P56159 Y_RNA.49-201ENST00000362714 112 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 SNORA63.4-201ENST00000362763 126 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 SNORD38B-201ENST00000384690 67 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 RNU4-69P-201ENST00000410677 143 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
GFRA1P56159 AC245047.7-201ENST00000440265 293 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 MIR6715A-201ENST00000615929 79 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 SNORD38B-202ENST00000625943 69 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
GFRA1P56159 Y_RNA.85-201ENST00000363014 111 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 SNORA63.5-201ENST00000363548 123 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 RNU6-755P-201ENST00000364400 103 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 Y_RNA.549-201ENST00000384657 102 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 SNORD77B-201ENST00000391112 67 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 RNU6-602P-201ENST00000411155 105 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 snoU13.26-201ENST00000459452 105 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 AL035470.1-201ENST00000622571 220 ntBASIC1.86□□□□□ -2.11
GFRA1P56159 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
GFRA1P56159 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
GFRA1P56159 RNU6-1107P-201ENST00000364817 104 ntBASIC1.85□□□□□ -2.11
GFRA1P56159 Y_RNA.470-201ENST00000384307 117 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms