Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AL023284.1-201ENST00000403956 276 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 RNU2-11P-201ENST00000459191 187 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 RN7SKP12-201ENST00000516275 143 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.11□□□□□ -1.91
BRPF1P55201 MIR3163-201ENST00000581592 73 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 MIR8074-201ENST00000615081 81 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 MIR1291-201ENST00000627649 87 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 MIR1245B-201ENST00000636115 69 ntBASIC3.11□□□□□ -1.91
BRPF1P55201 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BRPF1P55201 SNORA16B-201ENST00000364674 135 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 RNU6-1104P-201ENST00000384723 104 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 MIR17-201ENST00000385012 84 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.1□□□□□ -1.91
BRPF1P55201 RNU7-123P-201ENST00000515911 60 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 RNU6-638P-201ENST00000516582 104 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 AL162726.3-218ENST00000636401 95 ntBASIC3.1□□□□□ -1.91
BRPF1P55201 MIR21-201ENST00000362134 72 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 RNU6-573P-201ENST00000383938 106 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 RPL39P25-201ENST00000449384 154 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 MIR1273D-201ENST00000577266 86 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 MIR548AR-201ENST00000582191 57 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 MIR4305-201ENST00000583252 102 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 AC002984.1-201ENST00000591692 448 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 AC243994.1-201ENST00000618627 109 ntBASIC3.09□□□□□ -1.91
BRPF1P55201 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.09□□□□□ -1.91
BRPF1P55201 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
BRPF1P55201 DEFA7P-201ENST00000382676 285 ntBASIC3.08□□□□□ -1.92
BRPF1P55201 SNORA24-201ENST00000384096 131 ntBASIC3.08□□□□□ -1.92
BRPF1P55201 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BRPF1P55201 AL161935.2-201ENST00000414627 60 ntBASIC3.08□□□□□ -1.92
BRPF1P55201 DNAJC19P9-201ENST00000555084 351 ntBASIC3.08□□□□□ -1.92
BRPF1P55201 MIR4299-201ENST00000577899 72 ntBASIC3.08□□□□□ -1.92
BRPF1P55201 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.08□□□□□ -1.92
BRPF1P55201 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BRPF1P55201 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BRPF1P55201 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BRPF1P55201 Y_RNA.107-201ENST00000363190 121 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 MIR653-201ENST00000385279 96 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 MIR1912-201ENST00000410389 80 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.07□□□□□ -1.92
BRPF1P55201 HMGN2P23-201ENST00000456759 269 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 RNU6-958P-201ENST00000516995 106 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 AC022523.2-201ENST00000561045 150 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 MIR5007-201ENST00000583098 95 ntBASIC3.07□□□□□ -1.92
BRPF1P55201 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
BRPF1P55201 RNU4-36P-201ENST00000364294 144 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 AL022718.1-201ENST00000412004 84 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 RNU7-73P-201ENST00000458743 63 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 AC026436.1-201ENST00000510537 270 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 RNU2-13P-201ENST00000515909 113 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 Y_RNA.685-201ENST00000516532 108 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 DEFB131E-201ENST00000532329 154 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.06□□□□□ -1.92
BRPF1P55201 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.06□□□□□ -1.92
BRPF1P55201 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
BRPF1P55201 Y_RNA.342-201ENST00000365352 113 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 MIR520C-201ENST00000385005 87 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 RNU6-816P-201ENST00000390914 107 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 RNU6-1268P-201ENST00000391214 107 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 RNU6-1239P-201ENST00000391310 107 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 RNA5SP233-201ENST00000459153 113 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 AC026421.1-201ENST00000519101 163 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 AL357312.1-201ENST00000603879 298 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 MIR4791-201ENST00000607666 84 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 AC021613.1-201ENST00000623880 111 ntBASIC3.05□□□□□ -1.92
BRPF1P55201 SNORD114-30-201ENST00000364448 72 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU6-1134P-201ENST00000365156 101 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 Y_RNA.494-201ENST00000384432 111 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU6-1152P-201ENST00000384576 107 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 MIR1287-201ENST00000408492 90 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU6-592P-201ENST00000411333 103 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BRPF1P55201 snoU13.16-201ENST00000459350 104 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 SCARNA23-201ENST00000516060 130 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU6-917P-201ENST00000516294 104 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU2-35P-201ENST00000516446 142 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU7-6P-201ENST00000516845 62 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 AL513534.2-201ENST00000603836 250 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
BRPF1P55201 WWP1P1-201ENST00000466609 2769 ntBASIC3.04□□□□□ -1.92
BRPF1P55201 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.03□□□□□ -1.92
BRPF1P55201 RNA5SP82-201ENST00000516707 92 ntBASIC3.03□□□□□ -1.92
BRPF1P55201 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.03□□□□□ -1.92
BRPF1P55201 MIR4764-201ENST00000580680 88 ntBASIC3.03□□□□□ -1.92
BRPF1P55201 MIR494-201ENST00000349529 81 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 RNY3P2-201ENST00000362918 102 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 Y_RNA.466-201ENST00000384294 113 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 RNU6-1319P-201ENST00000390855 104 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 RNU6-747P-201ENST00000390928 104 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 SNORD28B-201ENST00000390993 75 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 RNU6-241P-201ENST00000391148 104 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 RNU6-177P-201ENST00000411257 104 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 AC234781.5-201ENST00000508429 271 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.02□□□□□ -1.93
BRPF1P55201 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
BRPF1P55201 RNU6-439P-201ENST00000384188 106 ntBASIC3.01□□□□□ -1.93
BRPF1P55201 HSPE1P19-201ENST00000603327 295 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms