Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORA18.4-201ENST00000516440 124 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 RNU6-126P-201ENST00000516685 103 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 AC004812.1-201ENST00000540773 146 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 SNORD115-40-201ENST00000606510 82 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 AC243994.1-201ENST00000618627 109 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 MIR6516-201ENST00000630554 81 ntBASIC0.83□□□□□ -2.28
HMGCS2P54868 RNU6-654P-201ENST00000364373 107 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 SNORA1-201ENST00000384107 130 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU4-43P-201ENST00000410628 137 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU7-90P-201ENST00000459216 62 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 SNORD124-201ENST00000459577 104 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HMGCS2P54868 AC004817.2-201ENST00000561794 651 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 MIR4744-201ENST00000581563 82 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 MIR376A2-201ENST00000636782 80 ntBASIC0.82□□□□□ -2.28
HMGCS2P54868 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HMGCS2P54868 RNU6-103P-201ENST00000363686 107 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 Y_RNA.199-201ENST00000364014 102 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 Y_RNA.241-201ENST00000364470 117 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 RNU6-923P-201ENST00000364753 107 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 SNORA20.1-201ENST00000364790 130 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 SNORA40.5-201ENST00000391061 128 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 SNORD77.3-201ENST00000391113 65 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 AC090844.1-201ENST00000422019 156 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 RNU4-71P-201ENST00000516258 113 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 AP003484.1-201ENST00000530974 250 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 AP000942.4-201ENST00000604811 241 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 RNU2-4P-201ENST00000606190 192 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 AC134878.1-201ENST00000619901 243 ntBASIC0.81□□□□□ -2.28
HMGCS2P54868 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
HMGCS2P54868 Y_RNA.330-201ENST00000365230 109 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 RNU6-578P-201ENST00000390980 103 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 SNORA26-201ENST00000391286 122 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGCS2P54868 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 AC131055.1-201ENST00000584626 316 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
HMGCS2P54868 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGCS2P54868 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGCS2P54868 Y_RNA.7-201ENST00000362352 102 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 RNU6-728P-201ENST00000365375 104 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 SNORA27-201ENST00000384323 126 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 RNU6-913P-201ENST00000390913 95 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 RNA5SP95-201ENST00000410319 137 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
HMGCS2P54868 Y_RNA.121-201ENST00000363309 113 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 Y_RNA.440-201ENST00000384120 114 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 Y_RNA.571-201ENST00000384753 98 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 RNU6-918P-201ENST00000391219 106 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 RNU6-613P-201ENST00000410412 108 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 AC107297.1-201ENST00000459991 176 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 RNU6-958P-201ENST00000516995 106 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.78□□□□□ -2.28
HMGCS2P54868 MIR8055-201ENST00000610739 97 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
HMGCS2P54868 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HMGCS2P54868 RNU6-978P-201ENST00000364371 103 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 RNU6-47P-201ENST00000383866 107 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 Y_RNA.410-201ENST00000383992 113 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 RNU6-125P-201ENST00000384505 107 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 MIR193B-201ENST00000384907 83 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 snosnR66.1-201ENST00000391095 99 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.77□□□□□ -2.29
HMGCS2P54868 AL121914.1-201ENST00000450188 156 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 RNU7-73P-201ENST00000458743 63 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 RNU7-67P-201ENST00000459003 62 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 RPS29P24-201ENST00000486345 171 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 AC009779.6-201ENST00000603972 165 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
HMGCS2P54868 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HMGCS2P54868 MIR411-201ENST00000362239 96 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 RNU6-1189P-201ENST00000383958 107 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 MIR3129-201ENST00000581095 76 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 AL365205.2-201ENST00000594586 68 ntBASIC0.76□□□□□ -2.29
HMGCS2P54868 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 RNU6-379P-201ENST00000363813 104 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.182-201ENST00000363880 111 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 Y_RNA.200-201ENST00000364018 102 ntBASIC0.75□□□□□ -2.29
HMGCS2P54868 SNORD113.3-201ENST00000364630 78 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms