Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 Y_RNA.416-201ENST00000384014 113 ntBASIC0.56□□□□□ -2.32
SAA4P35542 RNU6-472P-201ENST00000384299 107 ntBASIC0.56□□□□□ -2.32
SAA4P35542 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
SAA4P35542 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.56□□□□□ -2.32
SAA4P35542 RNU7-62P-201ENST00000458856 62 ntBASIC0.56□□□□□ -2.32
SAA4P35542 RNU7-96P-201ENST00000459535 64 ntBASIC0.56□□□□□ -2.32
SAA4P35542 AC008737.2-201ENST00000599446 118 ntBASIC0.56□□□□□ -2.32
SAA4P35542 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SAA4P35542 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SAA4P35542 Y_RNA.145-201ENST00000363527 102 ntBASIC0.55□□□□□ -2.32
SAA4P35542 Y_RNA.440-201ENST00000384120 114 ntBASIC0.55□□□□□ -2.32
SAA4P35542 SNORD77.3-201ENST00000391113 65 ntBASIC0.55□□□□□ -2.32
SAA4P35542 RNU6-381P-201ENST00000391259 108 ntBASIC0.55□□□□□ -2.32
SAA4P35542 HMGN1P33-201ENST00000432945 451 ntBASIC0.55□□□□□ -2.32
SAA4P35542 AL138752.1-201ENST00000452964 351 ntBASIC0.55□□□□□ -2.32
SAA4P35542 RNU2-11P-201ENST00000459191 187 ntBASIC0.55□□□□□ -2.32
SAA4P35542 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.55□□□□□ -2.32
SAA4P35542 RNU6-998P-201ENST00000515894 101 ntBASIC0.55□□□□□ -2.32
SAA4P35542 RNU6-977P-201ENST00000516411 103 ntBASIC0.55□□□□□ -2.32
SAA4P35542 AL117187.1-201ENST00000555482 181 ntBASIC0.55□□□□□ -2.32
SAA4P35542 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
SAA4P35542 RNU6-653P-201ENST00000363074 106 ntBASIC0.54□□□□□ -2.32
SAA4P35542 SNORA1.1-201ENST00000364671 133 ntBASIC0.54□□□□□ -2.32
SAA4P35542 Y_RNA.352-201ENST00000365439 102 ntBASIC0.54□□□□□ -2.32
SAA4P35542 Y_RNA.354-201ENST00000365448 111 ntBASIC0.54□□□□□ -2.32
SAA4P35542 RNU6-602P-201ENST00000411155 105 ntBASIC0.54□□□□□ -2.32
SAA4P35542 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
SAA4P35542 MIR4643-201ENST00000577473 78 ntBASIC0.54□□□□□ -2.32
SAA4P35542 MIR4771-2-201ENST00000577758 74 ntBASIC0.54□□□□□ -2.32
SAA4P35542 MIR4771-1-201ENST00000582617 74 ntBASIC0.54□□□□□ -2.32
SAA4P35542 MIR6515-201ENST00000619843 57 ntBASIC0.54□□□□□ -2.32
SAA4P35542 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SAA4P35542 Y_RNA.7-201ENST00000362352 102 ntBASIC0.53□□□□□ -2.32
SAA4P35542 Y_RNA.262-201ENST00000364641 102 ntBASIC0.53□□□□□ -2.32
SAA4P35542 Y_RNA.396-201ENST00000383949 103 ntBASIC0.53□□□□□ -2.32
SAA4P35542 SNORA1-201ENST00000384107 130 ntBASIC0.53□□□□□ -2.32
SAA4P35542 MIR520F-201ENST00000384824 87 ntBASIC0.53□□□□□ -2.32
SAA4P35542 RNA5SP222-201ENST00000411039 105 ntBASIC0.53□□□□□ -2.32
SAA4P35542 MTND5P15-201ENST00000434246 349 ntBASIC0.53□□□□□ -2.32
SAA4P35542 MIR4804-201ENST00000581683 73 ntBASIC0.53□□□□□ -2.32
SAA4P35542 MIR6740-201ENST00000618268 113 ntBASIC0.53□□□□□ -2.32
SAA4P35542 Y_RNA.23-201ENST00000362496 106 ntBASIC0.52□□□□□ -2.33
SAA4P35542 Y_RNA.47-201ENST00000362697 108 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU6-1309P-201ENST00000363305 108 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU1-133P-201ENST00000364867 167 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU6-728P-201ENST00000365375 104 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU4-17P-201ENST00000365598 141 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU6-738P-201ENST00000384531 106 ntBASIC0.52□□□□□ -2.33
SAA4P35542 MIR489-201ENST00000384923 84 ntBASIC0.52□□□□□ -2.33
SAA4P35542 MIR520H-201ENST00000385126 88 ntBASIC0.52□□□□□ -2.33
SAA4P35542 MIR548I3-201ENST00000408378 149 ntBASIC0.52□□□□□ -2.33
SAA4P35542 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
SAA4P35542 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
SAA4P35542 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
SAA4P35542 RNU6-561P-201ENST00000516222 102 ntBASIC0.52□□□□□ -2.33
SAA4P35542 MIR4676-201ENST00000583078 72 ntBASIC0.52□□□□□ -2.33
SAA4P35542 AC020891.4-201ENST00000605745 93 ntBASIC0.52□□□□□ -2.33
SAA4P35542 AL442067.1-201ENST00000613261 223 ntBASIC0.52□□□□□ -2.33
SAA4P35542 uc_338.6-201ENST00000613544 171 ntBASIC0.52□□□□□ -2.33
SAA4P35542 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SAA4P35542 MIR342-201ENST00000362212 99 ntBASIC0.51□□□□□ -2.33
SAA4P35542 RNY1-201ENST00000364228 113 ntBASIC0.51□□□□□ -2.33
SAA4P35542 Y_RNA.277-201ENST00000364754 102 ntBASIC0.51□□□□□ -2.33
SAA4P35542 MIR588-201ENST00000384900 83 ntBASIC0.51□□□□□ -2.33
SAA4P35542 MIR573-201ENST00000384964 99 ntBASIC0.51□□□□□ -2.33
SAA4P35542 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SAA4P35542 SNORA79-201ENST00000408376 140 ntBASIC0.51□□□□□ -2.33
SAA4P35542 RNU6-1190P-201ENST00000410811 104 ntBASIC0.51□□□□□ -2.33
SAA4P35542 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
SAA4P35542 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
SAA4P35542 AC011921.3-201ENST00000605540 361 ntBASIC0.51□□□□□ -2.33
SAA4P35542 MIR7111-201ENST00000619751 72 ntBASIC0.51□□□□□ -2.33
SAA4P35542 Y_RNA.54-201ENST00000362766 105 ntBASIC0.5□□□□□ -2.33
SAA4P35542 Y_RNA.76-201ENST00000362931 109 ntBASIC0.5□□□□□ -2.33
SAA4P35542 RNU6-103P-201ENST00000363686 107 ntBASIC0.5□□□□□ -2.33
SAA4P35542 Y_RNA.292-201ENST00000364904 97 ntBASIC0.5□□□□□ -2.33
SAA4P35542 Y_RNA.351-201ENST00000365436 96 ntBASIC0.5□□□□□ -2.33
SAA4P35542 Y_RNA.459-201ENST00000384251 102 ntBASIC0.5□□□□□ -2.33
SAA4P35542 Y_RNA.542-201ENST00000384641 111 ntBASIC0.5□□□□□ -2.33
SAA4P35542 RNU6-1011P-201ENST00000384668 107 ntBASIC0.5□□□□□ -2.33
SAA4P35542 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
SAA4P35542 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.5□□□□□ -2.33
SAA4P35542 RNU7-56P-201ENST00000458744 62 ntBASIC0.5□□□□□ -2.33
SAA4P35542 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
SAA4P35542 AC010332.2-201ENST00000613083 1904 ntBASIC0.5□□□□□ -2.33
SAA4P35542 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
SAA4P35542 Y_RNA.149-201ENST00000363558 117 ntBASIC0.49□□□□□ -2.33
SAA4P35542 SNORA36.2-201ENST00000384004 127 ntBASIC0.49□□□□□ -2.33
SAA4P35542 SNORD12C-201ENST00000386307 89 ntBASIC0.49□□□□□ -2.33
SAA4P35542 RNU4-43P-201ENST00000410628 137 ntBASIC0.49□□□□□ -2.33
SAA4P35542 Y_RNA.618-201ENST00000410949 107 ntBASIC0.49□□□□□ -2.33
SAA4P35542 RNU6-177P-201ENST00000411257 104 ntBASIC0.49□□□□□ -2.33
SAA4P35542 AL358176.2-201ENST00000425769 204 ntBASIC0.49□□□□□ -2.33
SAA4P35542 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.49□□□□□ -2.33
SAA4P35542 SNORD127-201ENST00000458892 86 ntBASIC0.49□□□□□ -2.33
SAA4P35542 RNU6-1132P-201ENST00000459214 107 ntBASIC0.49□□□□□ -2.33
SAA4P35542 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
SAA4P35542 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.49□□□□□ -2.33
SAA4P35542 MIR3129-201ENST00000581095 76 ntBASIC0.49□□□□□ -2.33
SAA4P35542 MIR6717-201ENST00000622747 73 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms