Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR8057-201ENST00000620957 69 ntBASIC2.77□□□□□ -1.97
GPC1P35052 AC008133.2-201ENST00000624540 351 ntBASIC2.77□□□□□ -1.97
GPC1P35052 AL161431.1-201ENST00000618966 4205 ntBASIC2.77□□□□□ -1.97
GPC1P35052 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
GPC1P35052 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
GPC1P35052 Y_RNA.173-201ENST00000363776 113 ntBASIC2.76□□□□□ -1.97
GPC1P35052 SNORA38-201ENST00000363946 132 ntBASIC2.76□□□□□ -1.97
GPC1P35052 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-480P-201ENST00000384332 107 ntBASIC2.76□□□□□ -1.97
GPC1P35052 NDUFB4P4-201ENST00000404822 243 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-447P-201ENST00000410293 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-1118P-201ENST00000410382 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-1076P-201ENST00000410397 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-355P-201ENST00000410427 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-791P-201ENST00000410467 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-705P-201ENST00000410601 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-1100P-201ENST00000410691 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-860P-201ENST00000410860 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-1217P-201ENST00000411276 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 RNU6-785P-201ENST00000411324 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 U6.90-201ENST00000614007 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
GPC1P35052 U6.70-201ENST00000620287 104 ntBASIC2.76□□□□□ -1.97
GPC1P35052 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GPC1P35052 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GPC1P35052 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
GPC1P35052 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GPC1P35052 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
GPC1P35052 Y_RNA.168-201ENST00000363740 102 ntBASIC2.75□□□□□ -1.97
GPC1P35052 Y_RNA.565-201ENST00000384719 101 ntBASIC2.75□□□□□ -1.97
GPC1P35052 RNA5SP465-201ENST00000391195 109 ntBASIC2.75□□□□□ -1.97
GPC1P35052 AL023284.1-201ENST00000403956 276 ntBASIC2.75□□□□□ -1.97
GPC1P35052 RNU6-519P-201ENST00000410590 108 ntBASIC2.75□□□□□ -1.97
GPC1P35052 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GPC1P35052 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
GPC1P35052 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
GPC1P35052 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
GPC1P35052 RNU6-112P-201ENST00000363599 104 ntBASIC2.74□□□□□ -1.97
GPC1P35052 MIR518A2-201ENST00000384966 87 ntBASIC2.74□□□□□ -1.97
GPC1P35052 SNORA48.1-201ENST00000390879 135 ntBASIC2.74□□□□□ -1.97
GPC1P35052 AC027119.1-201ENST00000440877 241 ntBASIC2.74□□□□□ -1.97
GPC1P35052 RNU7-43P-201ENST00000516554 64 ntBASIC2.74□□□□□ -1.97
GPC1P35052 RNA5SP481-201ENST00000516814 122 ntBASIC2.74□□□□□ -1.97
GPC1P35052 RNA5SP137-201ENST00000516833 135 ntBASIC2.74□□□□□ -1.97
GPC1P35052 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.74□□□□□ -1.97
GPC1P35052 SUB1P4-201ENST00000566062 339 ntBASIC2.74□□□□□ -1.97
GPC1P35052 MIR4764-201ENST00000580680 88 ntBASIC2.74□□□□□ -1.97
GPC1P35052 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.74□□□□□ -1.97
GPC1P35052 AP001362.1-201ENST00000625165 124 ntBASIC2.74□□□□□ -1.97
GPC1P35052 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
GPC1P35052 SNORA2B-201ENST00000384583 137 ntBASIC2.73□□□□□ -1.97
GPC1P35052 MIR520C-201ENST00000385005 87 ntBASIC2.73□□□□□ -1.97
GPC1P35052 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
GPC1P35052 RNA5SP501-201ENST00000410990 112 ntBASIC2.73□□□□□ -1.97
GPC1P35052 AC105272.1-201ENST00000438604 198 ntBASIC2.73□□□□□ -1.97
GPC1P35052 SNORD14A-201ENST00000606526 91 ntBASIC2.73□□□□□ -1.97
GPC1P35052 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.73□□□□□ -1.97
GPC1P35052 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
GPC1P35052 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
GPC1P35052 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.72□□□□□ -1.97
GPC1P35052 MIR424-201ENST00000362227 98 ntBASIC2.72□□□□□ -1.97
GPC1P35052 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
GPC1P35052 RNU6-296P-201ENST00000384608 107 ntBASIC2.72□□□□□ -1.97
GPC1P35052 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
GPC1P35052 RNU6-788P-201ENST00000390967 104 ntBASIC2.72□□□□□ -1.97
GPC1P35052 RNA5SP237-201ENST00000410414 113 ntBASIC2.72□□□□□ -1.97
GPC1P35052 HMGN2P35-201ENST00000412164 270 ntBASIC2.72□□□□□ -1.97
GPC1P35052 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
GPC1P35052 MIR548AO-201ENST00000579992 96 ntBASIC2.72□□□□□ -1.97
GPC1P35052 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.72□□□□□ -1.97
GPC1P35052 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.97
GPC1P35052 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GPC1P35052 RNY1P13-201ENST00000365030 105 ntBASIC2.71□□□□□ -1.98
GPC1P35052 SUMO1P4-201ENST00000429430 302 ntBASIC2.71□□□□□ -1.98
GPC1P35052 RNU7-153P-201ENST00000516455 62 ntBASIC2.71□□□□□ -1.98
GPC1P35052 AC133485.1-201ENST00000567176 124 ntBASIC2.71□□□□□ -1.98
GPC1P35052 AC140658.3-201ENST00000567603 271 ntBASIC2.71□□□□□ -1.98
GPC1P35052 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
GPC1P35052 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
GPC1P35052 RNU4-32P-201ENST00000363404 141 ntBASIC2.7□□□□□ -1.98
GPC1P35052 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
GPC1P35052 SNORD38B-201ENST00000384690 67 ntBASIC2.7□□□□□ -1.98
GPC1P35052 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
GPC1P35052 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
GPC1P35052 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
GPC1P35052 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
GPC1P35052 AC145423.2-201ENST00000610631 239 ntBASIC2.7□□□□□ -1.98
GPC1P35052 SNORD38B-202ENST00000625943 69 ntBASIC2.7□□□□□ -1.98
GPC1P35052 AC019129.1-201ENST00000403786 261 ntBASIC2.69□□□□□ -1.98
GPC1P35052 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.69□□□□□ -1.98
GPC1P35052 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GPC1P35052 RNU6-1229P-201ENST00000364295 107 ntBASIC2.68□□□□□ -1.98
GPC1P35052 RPS29P11-201ENST00000496507 171 ntBASIC2.68□□□□□ -1.98
GPC1P35052 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
GPC1P35052 MIR4251-201ENST00000635819 61 ntBASIC2.68□□□□□ -1.98
GPC1P35052 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
GPC1P35052 AC011753.1-201ENST00000451001 220 ntBASIC2.67□□□□□ -1.98
GPC1P35052 RNU6-917P-201ENST00000516294 104 ntBASIC2.67□□□□□ -1.98
GPC1P35052 SNORA9.3-201ENST00000516383 129 ntBASIC2.67□□□□□ -1.98
GPC1P35052 MIR5194-201ENST00000582634 120 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms