Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL022718.1-201ENST00000412004 84 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU7-73P-201ENST00000458743 63 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-922P-201ENST00000516753 99 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 Y_RNA.709-201ENST00000516952 92 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 AC015688.6-201ENST00000577737 104 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 MIR8063-201ENST00000621930 81 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 AC008133.2-201ENST00000624540 351 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC12P31275 Y_RNA.213-201ENST00000364178 111 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 SNORA22-201ENST00000383907 134 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 RNY4P18-201ENST00000391107 89 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 RNA5SP261-201ENST00000410536 106 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 RNU6-589P-201ENST00000516485 107 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 MIR5007-201ENST00000583098 95 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
HOXC12P31275 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 RNU6-1104P-201ENST00000384723 104 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 RNU6-1190P-201ENST00000410811 104 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 snoU13.16-201ENST00000459350 104 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 AC022523.2-201ENST00000561045 150 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 AC007012.1-201ENST00000567192 175 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 AL513534.2-201ENST00000603836 250 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 MIR6717-201ENST00000622747 73 ntBASIC2.01□□□□□ -2.09
HOXC12P31275 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HOXC12P31275 RNU6-880P-201ENST00000384526 107 ntBASIC2□□□□□ -2.09
HOXC12P31275 POLR2J4-204ENST00000418424 324 ntBASIC2□□□□□ -2.09
HOXC12P31275 AL512326.2-201ENST00000426359 151 ntBASIC2□□□□□ -2.09
HOXC12P31275 RNU6-893P-201ENST00000458841 100 ntBASIC2□□□□□ -2.09
HOXC12P31275 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
HOXC12P31275 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2□□□□□ -2.09
HOXC12P31275 AL020996.3-201ENST00000606617 222 ntBASIC2□□□□□ -2.09
HOXC12P31275 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
HOXC12P31275 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2□□□□□ -2.09
HOXC12P31275 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2□□□□□ -2.09
HOXC12P31275 WWP1P1-201ENST00000466609 2769 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 RNY4P6-201ENST00000363667 96 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 MT-TI-201ENST00000387365 69 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 SNORA26.6-201ENST00000391256 115 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 HMGN1P33-201ENST00000432945 451 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 HSPE1P24-201ENST00000450782 238 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 AC005908.1-201ENST00000468701 347 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 RNU7-41P-201ENST00000515917 61 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 AC004812.1-201ENST00000540773 146 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 MIR4251-201ENST00000635819 61 ntBASIC1.99□□□□□ -2.09
HOXC12P31275 Y_RNA.4-201ENST00000362333 112 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 SNORA22.1-201ENST00000362701 134 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 SNORA63.4-201ENST00000362763 126 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 SNORD41-201ENST00000386967 70 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 SNORA44.1-201ENST00000517031 108 ntBASIC1.98□□□□□ -2.09
HOXC12P31275 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXC12P31275 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
HOXC12P31275 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC12P31275 MIR21-201ENST00000362134 72 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 Y_RNA.171-201ENST00000363760 102 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 Y_RNA.338-201ENST00000365320 114 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 Y_RNA.531-201ENST00000384589 121 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 RNU7-113P-201ENST00000459273 62 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 PDCD5P2-201ENST00000507570 312 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 RNU6-947P-201ENST00000516264 106 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 RNU6-1258P-201ENST00000516911 111 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 MIR8055-201ENST00000610739 97 ntBASIC1.97□□□□□ -2.09
HOXC12P31275 SNORA1.1-201ENST00000364671 133 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 MIR221-201ENST00000385135 110 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 RPS3AP1-201ENST00000413190 320 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 AC063976.4-201ENST00000421971 163 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 RNU6-412P-201ENST00000516434 106 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 RNU7-6P-201ENST00000516845 62 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 MIR548AO-201ENST00000579992 96 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 GHRLOS.1-201ENST00000610995 70 ntBASIC1.96□□□□□ -2.1
HOXC12P31275 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HOXC12P31275 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HOXC12P31275 Y_RNA.164-201ENST00000363709 102 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 SNORD1A-201ENST00000364968 72 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 MIR3163-201ENST00000581592 73 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
HOXC12P31275 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HOXC12P31275 SNORA63.5-201ENST00000363548 123 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 Y_RNA.430-201ENST00000384081 110 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 Y_RNA.549-201ENST00000384657 102 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 SNORD12C-201ENST00000386307 89 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 AC079140.2-201ENST00000506193 142 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 RNA5SP33-201ENST00000516687 98 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
HOXC12P31275 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
HOXC12P31275 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms