Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-747P-201ENST00000390928 104 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNU6-241P-201ENST00000391148 104 ntBASIC1.73□□□□□ -2.13
CD40P25942 SNORA26.6-201ENST00000391256 115 ntBASIC1.73□□□□□ -2.13
CD40P25942 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNU6-177P-201ENST00000411257 104 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNU7-164P-201ENST00000459221 62 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
CD40P25942 Y_RNA.712-201ENST00000517011 92 ntBASIC1.73□□□□□ -2.13
CD40P25942 MIR3152-201ENST00000579801 74 ntBASIC1.73□□□□□ -2.13
CD40P25942 MIR3935-201ENST00000583472 104 ntBASIC1.73□□□□□ -2.13
CD40P25942 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
CD40P25942 RNA5SP205-201ENST00000364653 136 ntBASIC1.72□□□□□ -2.13
CD40P25942 SNORA1.1-201ENST00000364671 133 ntBASIC1.72□□□□□ -2.13
CD40P25942 RNA5SP261-201ENST00000410536 106 ntBASIC1.72□□□□□ -2.13
CD40P25942 RNA5SP144-201ENST00000410846 116 ntBASIC1.72□□□□□ -2.13
CD40P25942 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.72□□□□□ -2.13
CD40P25942 snoU13.25-201ENST00000458945 104 ntBASIC1.72□□□□□ -2.13
CD40P25942 AC079804.2-201ENST00000490376 200 ntBASIC1.72□□□□□ -2.13
CD40P25942 RNU6-165P-201ENST00000517170 99 ntBASIC1.72□□□□□ -2.13
CD40P25942 AL359881.1-201ENST00000602916 267 ntBASIC1.72□□□□□ -2.13
CD40P25942 AC025166.1-201ENST00000612411 163 ntBASIC1.72□□□□□ -2.13
CD40P25942 MIR6717-201ENST00000622747 73 ntBASIC1.72□□□□□ -2.13
CD40P25942 MIR3914-2-201ENST00000637339 95 ntBASIC1.72□□□□□ -2.13
CD40P25942 Y_RNA.298-201ENST00000364960 107 ntBASIC1.71□□□□□ -2.14
CD40P25942 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
CD40P25942 RNU7-123P-201ENST00000515911 60 ntBASIC1.71□□□□□ -2.14
CD40P25942 RNU2-35P-201ENST00000516446 142 ntBASIC1.71□□□□□ -2.14
CD40P25942 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.71□□□□□ -2.14
CD40P25942 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
CD40P25942 MIR8055-201ENST00000610739 97 ntBASIC1.71□□□□□ -2.14
CD40P25942 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
CD40P25942 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
CD40P25942 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
CD40P25942 SNORA22.1-201ENST00000362701 134 ntBASIC1.7□□□□□ -2.14
CD40P25942 Y_RNA.528-201ENST00000384575 108 ntBASIC1.7□□□□□ -2.14
CD40P25942 MIRLET7F2-201ENST00000385277 83 ntBASIC1.7□□□□□ -2.14
CD40P25942 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CD40P25942 AL022718.1-201ENST00000412004 84 ntBASIC1.7□□□□□ -2.14
CD40P25942 POLR2J4-204ENST00000418424 324 ntBASIC1.7□□□□□ -2.14
CD40P25942 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
CD40P25942 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
CD40P25942 AC025033.1-201ENST00000463883 194 ntBASIC1.7□□□□□ -2.14
CD40P25942 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.7□□□□□ -2.14
CD40P25942 CYP3A52P-201ENST00000563326 91 ntBASIC1.7□□□□□ -2.14
CD40P25942 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.7□□□□□ -2.14
CD40P25942 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.7□□□□□ -2.14
CD40P25942 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
CD40P25942 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNA5SP136-201ENST00000410906 107 ntBASIC1.69□□□□□ -2.14
CD40P25942 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
CD40P25942 RPS3AP1-201ENST00000413190 320 ntBASIC1.69□□□□□ -2.14
CD40P25942 AC090844.1-201ENST00000422019 156 ntBASIC1.69□□□□□ -2.14
CD40P25942 AC090255.1-201ENST00000495779 349 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNA5SP182-201ENST00000516064 82 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNU1-40P-201ENST00000516816 164 ntBASIC1.69□□□□□ -2.14
CD40P25942 RN7SKP88-201ENST00000516847 250 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNU1-97P-201ENST00000516872 164 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
CD40P25942 MIR5089-201ENST00000580047 84 ntBASIC1.69□□□□□ -2.14
CD40P25942 MIR4524B-201ENST00000581569 115 ntBASIC1.69□□□□□ -2.14
CD40P25942 7SK.8-201ENST00000612110 250 ntBASIC1.69□□□□□ -2.14
CD40P25942 7SK.11-201ENST00000615477 250 ntBASIC1.69□□□□□ -2.14
CD40P25942 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.69□□□□□ -2.14
CD40P25942 AL121890.5-201ENST00000620848 304 ntBASIC1.69□□□□□ -2.14
CD40P25942 7SK.13-201ENST00000622040 250 ntBASIC1.69□□□□□ -2.14
CD40P25942 Z97988.1-201ENST00000637697 135 ntBASIC1.69□□□□□ -2.14
CD40P25942 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
CD40P25942 Y_RNA.346-201ENST00000365385 112 ntBASIC1.68□□□□□ -2.14
CD40P25942 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
CD40P25942 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
CD40P25942 MIR6841-201ENST00000637129 72 ntBASIC1.68□□□□□ -2.14
CD40P25942 MTND5P18-201ENST00000445624 1801 ntBASIC1.68□□□□□ -2.14
CD40P25942 Y_RNA.171-201ENST00000363760 102 ntBASIC1.67□□□□□ -2.14
CD40P25942 Y_RNA.430-201ENST00000384081 110 ntBASIC1.67□□□□□ -2.14
CD40P25942 AL512326.2-201ENST00000426359 151 ntBASIC1.67□□□□□ -2.14
CD40P25942 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
CD40P25942 RNU6-893P-201ENST00000458841 100 ntBASIC1.67□□□□□ -2.14
CD40P25942 AL133373.1-201ENST00000497098 94 ntBASIC1.67□□□□□ -2.14
CD40P25942 SNORD33.1-201ENST00000516213 88 ntBASIC1.67□□□□□ -2.14
CD40P25942 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
CD40P25942 U6.95-201ENST00000636931 70 ntBASIC1.67□□□□□ -2.14
CD40P25942 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CD40P25942 RNU6-1290P-201ENST00000362957 109 ntBASIC1.66□□□□□ -2.14
CD40P25942 Y_RNA.563-201ENST00000384707 108 ntBASIC1.66□□□□□ -2.14
CD40P25942 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
CD40P25942 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
CD40P25942 MIR1302-7-201ENST00000408841 72 ntBASIC1.66□□□□□ -2.14
CD40P25942 RNU6-602P-201ENST00000411155 105 ntBASIC1.66□□□□□ -2.14
CD40P25942 RNU7-113P-201ENST00000459273 62 ntBASIC1.66□□□□□ -2.14
CD40P25942 AC108210.2-201ENST00000503681 201 ntBASIC1.66□□□□□ -2.14
CD40P25942 RNU6-1258P-201ENST00000516911 111 ntBASIC1.66□□□□□ -2.14
CD40P25942 AC004812.1-201ENST00000540773 146 ntBASIC1.66□□□□□ -2.14
CD40P25942 AC015712.3-201ENST00000559380 164 ntBASIC1.66□□□□□ -2.14
CD40P25942 AC022523.2-201ENST00000561045 150 ntBASIC1.66□□□□□ -2.14
CD40P25942 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
CD40P25942 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
CD40P25942 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.66□□□□□ -2.14
CD40P25942 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CD40P25942 MIR103A2-201ENST00000362154 78 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms