Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-554P-201ENST00000410466 106 ntBASIC2.64□□□□□ -1.99
RFX1P22670 RNU6-1190P-201ENST00000410811 104 ntBASIC2.64□□□□□ -1.99
RFX1P22670 RPL39P34-201ENST00000477141 156 ntBASIC2.64□□□□□ -1.99
RFX1P22670 RPS23P4-201ENST00000487908 423 ntBASIC2.64□□□□□ -1.99
RFX1P22670 RNA5SP320-201ENST00000516263 124 ntBASIC2.64□□□□□ -1.99
RFX1P22670 RNU6-1258P-201ENST00000516911 111 ntBASIC2.64□□□□□ -1.99
RFX1P22670 AC067747.1-201ENST00000608026 250 ntBASIC2.64□□□□□ -1.99
RFX1P22670 AC008133.2-201ENST00000624540 351 ntBASIC2.64□□□□□ -1.99
RFX1P22670 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
RFX1P22670 Y_RNA.299-201ENST00000364973 94 ntBASIC2.63□□□□□ -1.99
RFX1P22670 RNU6-1014P-201ENST00000383940 103 ntBASIC2.63□□□□□ -1.99
RFX1P22670 AL359511.1-201ENST00000402970 211 ntBASIC2.63□□□□□ -1.99
RFX1P22670 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
RFX1P22670 RNU7-113P-201ENST00000459273 62 ntBASIC2.63□□□□□ -1.99
RFX1P22670 MIR450A1-201ENST00000362262 91 ntBASIC2.62□□□□□ -1.99
RFX1P22670 MIR1289-2-201ENST00000408360 111 ntBASIC2.62□□□□□ -1.99
RFX1P22670 RN7SKP223-201ENST00000410582 62 ntBASIC2.62□□□□□ -1.99
RFX1P22670 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX1P22670 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX1P22670 RNA5SP233-201ENST00000459153 113 ntBASIC2.62□□□□□ -1.99
RFX1P22670 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.62□□□□□ -1.99
RFX1P22670 AC103810.8-201ENST00000607347 118 ntBASIC2.62□□□□□ -1.99
RFX1P22670 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
RFX1P22670 U8.6-201ENST00000364939 135 ntBASIC2.61□□□□□ -1.99
RFX1P22670 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
RFX1P22670 RNU6-250P-201ENST00000516958 103 ntBASIC2.61□□□□□ -1.99
RFX1P22670 AC068339.1-201ENST00000526965 141 ntBASIC2.61□□□□□ -1.99
RFX1P22670 AC006254.2-201ENST00000603259 279 ntBASIC2.61□□□□□ -1.99
RFX1P22670 AL357312.1-201ENST00000603879 298 ntBASIC2.61□□□□□ -1.99
RFX1P22670 AC087741.2-201ENST00000619415 172 ntBASIC2.61□□□□□ -1.99
RFX1P22670 Y_RNA.163-201ENST00000363702 113 ntBASIC2.6□□□□□ -1.99
RFX1P22670 RNA5SP99-201ENST00000364020 114 ntBASIC2.6□□□□□ -1.99
RFX1P22670 Y_RNA.495-201ENST00000384435 112 ntBASIC2.6□□□□□ -1.99
RFX1P22670 MIR1302-5-201ENST00000408164 150 ntBASIC2.6□□□□□ -1.99
RFX1P22670 AC113410.1-201ENST00000505029 247 ntBASIC2.6□□□□□ -1.99
RFX1P22670 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX1P22670 RNA5SP458-201ENST00000516188 119 ntBASIC2.6□□□□□ -1.99
RFX1P22670 SNORA72.7-201ENST00000516349 94 ntBASIC2.6□□□□□ -1.99
RFX1P22670 MIR5009-201ENST00000578736 100 ntBASIC2.6□□□□□ -1.99
RFX1P22670 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.6□□□□□ -1.99
RFX1P22670 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFX1P22670 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RFX1P22670 RNU6-32P-201ENST00000383948 107 ntBASIC2.59□□□□□ -1.99
RFX1P22670 RNU6-13P-201ENST00000384248 107 ntBASIC2.59□□□□□ -1.99
RFX1P22670 RNU6-12P-201ENST00000384604 107 ntBASIC2.59□□□□□ -1.99
RFX1P22670 RNU6-41P-201ENST00000384741 107 ntBASIC2.59□□□□□ -1.99
RFX1P22670 RNU4-69P-201ENST00000410677 143 ntBASIC2.59□□□□□ -1.99
RFX1P22670 RPS3AP1-201ENST00000413190 320 ntBASIC2.59□□□□□ -1.99
RFX1P22670 SNORA44.1-201ENST00000517031 108 ntBASIC2.59□□□□□ -1.99
RFX1P22670 AL627230.6-201ENST00000611129 280 ntBASIC2.59□□□□□ -1.99
RFX1P22670 MIR6895-201ENST00000613497 78 ntBASIC2.59□□□□□ -1.99
RFX1P22670 SNORD41-201ENST00000386967 70 ntBASIC2.58□□□□□ -2
RFX1P22670 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
RFX1P22670 AL356379.1-201ENST00000414105 126 ntBASIC2.58□□□□□ -2
RFX1P22670 HMGN1P33-201ENST00000432945 451 ntBASIC2.58□□□□□ -2
RFX1P22670 Y_RNA.694-201ENST00000516677 117 ntBASIC2.58□□□□□ -2
RFX1P22670 MIR5582-201ENST00000579697 68 ntBASIC2.58□□□□□ -2
RFX1P22670 AL353997.5-201ENST00000618886 171 ntBASIC2.58□□□□□ -2
RFX1P22670 Z97988.1-201ENST00000637697 135 ntBASIC2.58□□□□□ -2
RFX1P22670 AP000648.3-201ENST00000623539 4507 ntBASIC2.58□□□□□ -2
RFX1P22670 SNORA1.1-201ENST00000364671 133 ntBASIC2.57□□□□□ -2
RFX1P22670 Y_RNA.354-201ENST00000365448 111 ntBASIC2.57□□□□□ -2
RFX1P22670 Y_RNA.470-201ENST00000384307 117 ntBASIC2.57□□□□□ -2
RFX1P22670 RNA5SP33-201ENST00000516687 98 ntBASIC2.57□□□□□ -2
RFX1P22670 MIR1273D-201ENST00000577266 86 ntBASIC2.57□□□□□ -2
RFX1P22670 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
RFX1P22670 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.57□□□□□ -2
RFX1P22670 AL162726.3-218ENST00000636401 95 ntBASIC2.57□□□□□ -2
RFX1P22670 MIR21-201ENST00000362134 72 ntBASIC2.56□□□□□ -2
RFX1P22670 MIR30A-201ENST00000385092 71 ntBASIC2.56□□□□□ -2
RFX1P22670 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
RFX1P22670 RNA5SP402-201ENST00000517148 110 ntBASIC2.56□□□□□ -2
RFX1P22670 GHRLOS.1-201ENST00000610995 70 ntBASIC2.56□□□□□ -2
RFX1P22670 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RFX1P22670 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RFX1P22670 SNORD115-19-201ENST00000363098 82 ntBASIC2.55□□□□□ -2
RFX1P22670 SNORD115-18-201ENST00000363293 82 ntBASIC2.55□□□□□ -2
RFX1P22670 SNORD115-17-201ENST00000364612 82 ntBASIC2.55□□□□□ -2
RFX1P22670 RNU6-756P-201ENST00000383997 107 ntBASIC2.55□□□□□ -2
RFX1P22670 SNORA51.5-201ENST00000384126 131 ntBASIC2.55□□□□□ -2
RFX1P22670 RNU7-41P-201ENST00000515917 61 ntBASIC2.55□□□□□ -2
RFX1P22670 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
RFX1P22670 MIR4251-201ENST00000635819 61 ntBASIC2.55□□□□□ -2
RFX1P22670 MIR302D-201ENST00000362275 68 ntBASIC2.54□□□□□ -2
RFX1P22670 RNU6-766P-201ENST00000362478 107 ntBASIC2.54□□□□□ -2
RFX1P22670 RNA5SP48-201ENST00000363969 126 ntBASIC2.54□□□□□ -2
RFX1P22670 Y_RNA.328-201ENST00000365208 113 ntBASIC2.54□□□□□ -2
RFX1P22670 RNA5SP247-201ENST00000411181 105 ntBASIC2.54□□□□□ -2
RFX1P22670 Y_RNA.677-201ENST00000516401 85 ntBASIC2.54□□□□□ -2
RFX1P22670 RNU6-922P-201ENST00000516753 99 ntBASIC2.54□□□□□ -2
RFX1P22670 MIR548AO-201ENST00000579992 96 ntBASIC2.54□□□□□ -2
RFX1P22670 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
RFX1P22670 MIR548AE2-201ENST00000583456 67 ntBASIC2.54□□□□□ -2
RFX1P22670 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
RFX1P22670 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
RFX1P22670 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFX1P22670 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
RFX1P22670 SNORD33-201ENST00000362761 85 ntBASIC2.53□□□□□ -2
RFX1P22670 RNU6-816P-201ENST00000390914 107 ntBASIC2.53□□□□□ -2
RFX1P22670 RNU6-1268P-201ENST00000391214 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms