Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
RXRAP19793 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
RXRAP19793 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
RXRAP19793 SNORD50.2-201ENST00000365465 70 ntBASIC1.32□□□□□ -2.2
RXRAP19793 Y_RNA.497-201ENST00000384447 98 ntBASIC1.32□□□□□ -2.2
RXRAP19793 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
RXRAP19793 RNU6-1067P-201ENST00000384752 107 ntBASIC1.32□□□□□ -2.2
RXRAP19793 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RXRAP19793 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.32□□□□□ -2.2
RXRAP19793 RNU7-197P-201ENST00000458836 62 ntBASIC1.32□□□□□ -2.2
RXRAP19793 RNU2-13P-201ENST00000515909 113 ntBASIC1.32□□□□□ -2.2
RXRAP19793 SNORA18.4-201ENST00000516440 124 ntBASIC1.32□□□□□ -2.2
RXRAP19793 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
RXRAP19793 MIR3910-1-201ENST00000580936 111 ntBASIC1.32□□□□□ -2.2
RXRAP19793 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
RXRAP19793 Y_RNA.363-201ENST00000365529 113 ntBASIC1.31□□□□□ -2.2
RXRAP19793 Y_RNA.370-201ENST00000365589 108 ntBASIC1.31□□□□□ -2.2
RXRAP19793 Y_RNA.420-201ENST00000384043 110 ntBASIC1.31□□□□□ -2.2
RXRAP19793 SNORA20-201ENST00000384662 132 ntBASIC1.31□□□□□ -2.2
RXRAP19793 MIR624-201ENST00000385217 97 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNU6-460P-201ENST00000391158 108 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNA5SP127-201ENST00000411051 133 ntBASIC1.31□□□□□ -2.2
RXRAP19793 AC087499.4-201ENST00000448505 178 ntBASIC1.31□□□□□ -2.2
RXRAP19793 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.31□□□□□ -2.2
RXRAP19793 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNU6-789P-201ENST00000517105 102 ntBASIC1.31□□□□□ -2.2
RXRAP19793 RNU7-181P-201ENST00000517234 74 ntBASIC1.31□□□□□ -2.2
RXRAP19793 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
RXRAP19793 AC010332.2-201ENST00000613083 1904 ntBASIC1.3□□□□□ -2.2
RXRAP19793 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
RXRAP19793 Y_RNA.118-201ENST00000363300 101 ntBASIC1.3□□□□□ -2.2
RXRAP19793 SNORD115-28-201ENST00000363931 81 ntBASIC1.3□□□□□ -2.2
RXRAP19793 Y_RNA.251-201ENST00000364551 99 ntBASIC1.3□□□□□ -2.2
RXRAP19793 RNU6-1292P-201ENST00000383856 107 ntBASIC1.3□□□□□ -2.2
RXRAP19793 SNORA80D-201ENST00000384488 135 ntBASIC1.3□□□□□ -2.2
RXRAP19793 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
RXRAP19793 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
RXRAP19793 Y_RNA.584-201ENST00000391090 114 ntBASIC1.3□□□□□ -2.2
RXRAP19793 SNORD77.3-201ENST00000391113 65 ntBASIC1.3□□□□□ -2.2
RXRAP19793 AF228730.3-201ENST00000436691 102 ntBASIC1.3□□□□□ -2.2
RXRAP19793 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.3□□□□□ -2.2
RXRAP19793 RNU6-406P-201ENST00000516470 107 ntBASIC1.3□□□□□ -2.2
RXRAP19793 MIR8070-201ENST00000616510 88 ntBASIC1.3□□□□□ -2.2
RXRAP19793 MIR518E-201ENST00000385252 88 ntBASIC1.29□□□□□ -2.2
RXRAP19793 RNU6-257P-201ENST00000410238 98 ntBASIC1.29□□□□□ -2.2
RXRAP19793 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.29□□□□□ -2.2
RXRAP19793 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
RXRAP19793 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
RXRAP19793 RPS26P48-201ENST00000491713 339 ntBASIC1.29□□□□□ -2.2
RXRAP19793 AC131055.1-201ENST00000584626 316 ntBASIC1.29□□□□□ -2.2
RXRAP19793 AC134878.1-201ENST00000619901 243 ntBASIC1.29□□□□□ -2.2
RXRAP19793 MIR4251-201ENST00000635819 61 ntBASIC1.29□□□□□ -2.2
RXRAP19793 Y_RNA.37-201ENST00000362606 108 ntBASIC1.28□□□□□ -2.2
RXRAP19793 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
RXRAP19793 Y_RNA.508-201ENST00000384502 114 ntBASIC1.28□□□□□ -2.2
RXRAP19793 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
RXRAP19793 SNORA40-201ENST00000388090 126 ntBASIC1.28□□□□□ -2.2
RXRAP19793 Y_RNA.586-201ENST00000391146 98 ntBASIC1.28□□□□□ -2.2
RXRAP19793 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
RXRAP19793 SNORD36C-201ENST00000516733 66 ntBASIC1.28□□□□□ -2.2
RXRAP19793 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.28□□□□□ -2.2
RXRAP19793 MIR376A2-201ENST00000636782 80 ntBASIC1.28□□□□□ -2.2
RXRAP19793 AC132825.6-201ENST00000638861 357 ntBASIC1.28□□□□□ -2.2
RXRAP19793 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
RXRAP19793 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
RXRAP19793 SNORD115-34-201ENST00000362441 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-12-201ENST00000362583 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-29-201ENST00000362834 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-9-201ENST00000362912 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-21-201ENST00000362963 81 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-14-201ENST00000363090 81 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-13-201ENST00000363358 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-41-201ENST00000363608 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-11-201ENST00000363616 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-5-201ENST00000363633 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-39-201ENST00000363694 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-4-201ENST00000363810 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-16-201ENST00000363887 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-6-201ENST00000363942 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-42-201ENST00000364273 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-15-201ENST00000364809 81 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNU6-915P-201ENST00000364943 103 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-1-201ENST00000364961 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-26-201ENST00000365067 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-10-201ENST00000365073 81 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-43-201ENST00000365503 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-36-201ENST00000365629 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNU6-1189P-201ENST00000383958 107 ntBASIC1.27□□□□□ -2.21
RXRAP19793 Y_RNA.410-201ENST00000383992 113 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORA24-201ENST00000384096 131 ntBASIC1.27□□□□□ -2.21
RXRAP19793 MTND4LP9-201ENST00000427694 174 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNU11-2P-201ENST00000516898 142 ntBASIC1.27□□□□□ -2.21
RXRAP19793 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
RXRAP19793 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.27□□□□□ -2.21
RXRAP19793 AP001328.1-201ENST00000528550 176 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms