Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6-785P-201ENST00000411324 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 EEF1A1P41-201ENST00000414667 207 ntBASIC2.64□□□□□ -1.99
NID1P14543 AC234781.5-201ENST00000508429 271 ntBASIC2.64□□□□□ -1.99
NID1P14543 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.64□□□□□ -1.99
NID1P14543 AC140658.3-201ENST00000567603 271 ntBASIC2.64□□□□□ -1.99
NID1P14543 U6.90-201ENST00000614007 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 U6.70-201ENST00000620287 104 ntBASIC2.64□□□□□ -1.99
NID1P14543 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NID1P14543 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NID1P14543 SNORD114-10-201ENST00000363409 72 ntBASIC2.63□□□□□ -1.99
NID1P14543 Y_RNA.173-201ENST00000363776 113 ntBASIC2.63□□□□□ -1.99
NID1P14543 RNA5SP138-201ENST00000365098 114 ntBASIC2.63□□□□□ -1.99
NID1P14543 RNU6-480P-201ENST00000384332 107 ntBASIC2.63□□□□□ -1.99
NID1P14543 RNU6-1321P-201ENST00000390905 107 ntBASIC2.63□□□□□ -1.99
NID1P14543 MIR8055-201ENST00000610739 97 ntBASIC2.63□□□□□ -1.99
NID1P14543 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.63□□□□□ -1.99
NID1P14543 U7.4-201ENST00000614961 63 ntBASIC2.63□□□□□ -1.99
NID1P14543 AC012676.2-201ENST00000619258 186 ntBASIC2.63□□□□□ -1.99
NID1P14543 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NID1P14543 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NID1P14543 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.63□□□□□ -1.99
NID1P14543 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NID1P14543 MIR181B2-201ENST00000385004 89 ntBASIC2.62□□□□□ -1.99
NID1P14543 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NID1P14543 RNU6-602P-201ENST00000411155 105 ntBASIC2.62□□□□□ -1.99
NID1P14543 BX510359.4-201ENST00000423750 193 ntBASIC2.62□□□□□ -1.99
NID1P14543 RNU7-48P-201ENST00000458875 63 ntBASIC2.62□□□□□ -1.99
NID1P14543 RNU7-79P-201ENST00000516082 62 ntBASIC2.62□□□□□ -1.99
NID1P14543 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
NID1P14543 MTND5P40-201ENST00000559945 246 ntBASIC2.62□□□□□ -1.99
NID1P14543 FAM106DP-201ENST00000586416 501 ntBASIC2.62□□□□□ -1.99
NID1P14543 AC104984.5-201ENST00000586878 94 ntBASIC2.62□□□□□ -1.99
NID1P14543 MIR8065-201ENST00000620577 100 ntBASIC2.62□□□□□ -1.99
NID1P14543 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NID1P14543 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NID1P14543 RNU6-315P-201ENST00000362666 107 ntBASIC2.61□□□□□ -1.99
NID1P14543 Y_RNA.98-201ENST00000363109 102 ntBASIC2.61□□□□□ -1.99
NID1P14543 Y_RNA.168-201ENST00000363740 102 ntBASIC2.61□□□□□ -1.99
NID1P14543 Y_RNA.545-201ENST00000384652 105 ntBASIC2.61□□□□□ -1.99
NID1P14543 MIR526A1-201ENST00000384897 85 ntBASIC2.61□□□□□ -1.99
NID1P14543 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
NID1P14543 RNU7-137P-201ENST00000516788 62 ntBASIC2.61□□□□□ -1.99
NID1P14543 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.61□□□□□ -1.99
NID1P14543 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
NID1P14543 AC105081.1-201ENST00000617727 106 ntBASIC2.61□□□□□ -1.99
NID1P14543 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NID1P14543 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NID1P14543 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
NID1P14543 RNU6-519P-201ENST00000410590 108 ntBASIC2.6□□□□□ -1.99
NID1P14543 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
NID1P14543 RPL23AP6-201ENST00000446637 472 ntBASIC2.6□□□□□ -1.99
NID1P14543 RN7SKP132-201ENST00000516001 208 ntBASIC2.6□□□□□ -1.99
NID1P14543 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
NID1P14543 AL513423.1-201ENST00000621695 132 ntBASIC2.6□□□□□ -1.99
NID1P14543 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.6□□□□□ -1.99
NID1P14543 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
NID1P14543 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
NID1P14543 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NID1P14543 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
NID1P14543 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
NID1P14543 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
NID1P14543 AC020891.4-201ENST00000605745 93 ntBASIC2.59□□□□□ -1.99
NID1P14543 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
NID1P14543 Z97988.1-201ENST00000637697 135 ntBASIC2.59□□□□□ -1.99
NID1P14543 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NID1P14543 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
NID1P14543 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.58□□□□□ -2
NID1P14543 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NID1P14543 RNA5SP432-201ENST00000362480 116 ntBASIC2.58□□□□□ -2
NID1P14543 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
NID1P14543 MIR597-201ENST00000384968 97 ntBASIC2.58□□□□□ -2
NID1P14543 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
NID1P14543 MIR660-201ENST00000385235 97 ntBASIC2.58□□□□□ -2
NID1P14543 RNU6-129P-201ENST00000391022 107 ntBASIC2.58□□□□□ -2
NID1P14543 RNU11-3P-201ENST00000391111 133 ntBASIC2.58□□□□□ -2
NID1P14543 RNU2-7P-201ENST00000410794 178 ntBASIC2.58□□□□□ -2
NID1P14543 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
NID1P14543 AC021506.2-201ENST00000612354 169 ntBASIC2.58□□□□□ -2
NID1P14543 AP001362.1-201ENST00000625165 124 ntBASIC2.58□□□□□ -2
NID1P14543 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
NID1P14543 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NID1P14543 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
NID1P14543 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NID1P14543 RNU4-82P-201ENST00000362443 140 ntBASIC2.57□□□□□ -2
NID1P14543 SNORA2B-201ENST00000384583 137 ntBASIC2.57□□□□□ -2
NID1P14543 MIR520A-201ENST00000384862 85 ntBASIC2.57□□□□□ -2
NID1P14543 MIR1236-201ENST00000408340 102 ntBASIC2.57□□□□□ -2
NID1P14543 RNA5SP344-201ENST00000411081 104 ntBASIC2.57□□□□□ -2
NID1P14543 CYP3A52P-201ENST00000563326 91 ntBASIC2.57□□□□□ -2
NID1P14543 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
NID1P14543 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
NID1P14543 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.57□□□□□ -2
NID1P14543 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
NID1P14543 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
NID1P14543 MIR1261-201ENST00000408659 82 ntBASIC2.56□□□□□ -2
NID1P14543 AC090255.1-201ENST00000495779 349 ntBASIC2.56□□□□□ -2
NID1P14543 SNORA74.3-201ENST00000517108 154 ntBASIC2.56□□□□□ -2
NID1P14543 MIR4709-201ENST00000577272 72 ntBASIC2.56□□□□□ -2
NID1P14543 MIR3945-201ENST00000581853 98 ntBASIC2.56□□□□□ -2
NID1P14543 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms