Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DOBP13765 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 AC091932.4-201ENST00000623386 200 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 MIR342-201ENST00000362212 99 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AL603914.1-201ENST00000401964 204 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 RNU7-95P-201ENST00000459222 64 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AC004223.1-201ENST00000479840 271 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 RNU6-346P-201ENST00000516288 111 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 MIR3133-201ENST00000583157 78 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AC104984.5-201ENST00000586878 94 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AL512598.1-201ENST00000610158 273 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 MIR8065-201ENST00000620577 100 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AP001340.1-201ENST00000624405 217 ntBASIC1.17□□□□□ -2.22
HLA-DOBP13765 AL596211.1-201ENST00000569873 2277 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 Y_RNA.420-201ENST00000384043 110 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 RNU6-460P-201ENST00000391158 108 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 AC245047.7-201ENST00000440265 293 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DOBP13765 AC009474.2-201ENST00000451383 136 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 RNU2-60P-201ENST00000517290 128 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 AC011603.4-201ENST00000611325 277 ntBASIC1.16□□□□□ -2.22
HLA-DOBP13765 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNU6-915P-201ENST00000364943 103 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 SNORD50.2-201ENST00000365465 70 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 Y_RNA.568-201ENST00000384742 113 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 AL603908.1-201ENST00000406098 201 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNA5SP261-201ENST00000410536 106 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 SNORA31.4-201ENST00000516049 129 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNU6-426P-201ENST00000516464 97 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNU6-113P-201ENST00000516653 101 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNU11-2P-201ENST00000516898 142 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 AP003716.2-201ENST00000528260 108 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 AP001328.1-201ENST00000528550 176 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 MIR548AO-201ENST00000579992 96 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 AL020996.3-201ENST00000606617 222 ntBASIC1.15□□□□□ -2.23
HLA-DOBP13765 RNU6-774P-201ENST00000363238 107 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 RNY1P6-201ENST00000384193 109 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 RNU6-913P-201ENST00000390913 95 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 BTF3P4-201ENST00000418852 495 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 SUMO1P3-201ENST00000439961 304 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 SNORA31.2-201ENST00000516019 134 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 Y_RNA.690-201ENST00000516603 95 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 AC010332.2-201ENST00000613083 1904 ntBASIC1.14□□□□□ -2.23
HLA-DOBP13765 MIR103A2-201ENST00000362154 78 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 SNORA25.3-201ENST00000363205 127 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 MIR613-201ENST00000385248 95 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 AL392103.1-201ENST00000447000 198 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 RPS29P23-201ENST00000458635 123 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 AC048334.1-201ENST00000477975 159 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 Y_RNA.692-201ENST00000516627 105 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
HLA-DOBP13765 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 PRELID3BP2-201ENST00000605362 201 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 MIR8055-201ENST00000610739 97 ntBASIC1.13□□□□□ -2.23
HLA-DOBP13765 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HLA-DOBP13765 SNORA1.1-201ENST00000364671 133 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 SNORA20-201ENST00000384662 132 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-1319P-201ENST00000390855 104 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-747P-201ENST00000390928 104 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-482P-201ENST00000391068 107 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-241P-201ENST00000391148 104 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-177P-201ENST00000411257 104 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 AP1B1P2-201ENST00000416196 106 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 Y_RNA.757-201ENST00000578934 114 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 MIR3152-201ENST00000579801 74 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 AP000942.3-201ENST00000603702 160 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 U7.2-201ENST00000607576 63 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 Z97988.1-201ENST00000637697 135 ntBASIC1.12□□□□□ -2.23
HLA-DOBP13765 RNU6-349P-201ENST00000362402 107 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DOBP13765 MIR1185-1-201ENST00000408598 86 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 MIR1302-7-201ENST00000408841 72 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 MIR2115-201ENST00000516657 100 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DOBP13765 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 TUG1_4.1-201ENST00000619464 181 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 AC021613.1-201ENST00000623880 111 ntBASIC1.11□□□□□ -2.23
HLA-DOBP13765 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DOBP13765 RNU6-704P-201ENST00000364162 103 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 RNU6-309P-201ENST00000364573 106 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 Y_RNA.430-201ENST00000384081 110 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 RNU6-187P-201ENST00000384139 106 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 SNORD26-201ENST00000384147 75 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 SNORA26.6-201ENST00000391256 115 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 RNU6-257P-201ENST00000410238 98 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
HLA-DOBP13765 Y_RNA.651-201ENST00000459380 103 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 252.6 ms