Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
VCANP13611 MIR519A2-201ENST00000384990 87 ntBASIC-3.06□□□□□ -2.9
VCANP13611 MTCO1P29-201ENST00000496868 288 ntBASIC-3.07□□□□□ -2.9
VCANP13611 RNU6-626P-201ENST00000363354 107 ntBASIC-3.08□□□□□ -2.9
VCANP13611 AF228730.4-201ENST00000421457 183 ntBASIC-3.08□□□□□ -2.9
VCANP13611 RNU6-531P-201ENST00000516694 104 ntBASIC-3.08□□□□□ -2.9
VCANP13611 RNU6-278P-201ENST00000390945 109 ntBASIC-3.08□□□□□ -2.9
VCANP13611 RNU5A-5P-201ENST00000411054 116 ntBASIC-3.08□□□□□ -2.9
VCANP13611 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.08□□□□□ -2.9
VCANP13611 MTND2P32-201ENST00000521584 1038 ntBASIC-3.08□□□□□ -2.9
VCANP13611 RNU6-637P-201ENST00000384050 107 ntBASIC-3.09□□□□□ -2.9
VCANP13611 MIR521-2-201ENST00000384818 87 ntBASIC-3.09□□□□□ -2.9
VCANP13611 RNA5SP454-201ENST00000517231 127 ntBASIC-3.09□□□□□ -2.9
VCANP13611 SCOCP1-201ENST00000554676 349 ntBASIC-3.09□□□□□ -2.9
VCANP13611 RNU6-325P-201ENST00000411132 105 ntBASIC-3.09□□□□□ -2.9
VCANP13611 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-3.09□□□□□ -2.9
VCANP13611 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-3.09□□□□□ -2.9
VCANP13611 RNU6-309P-201ENST00000364573 106 ntBASIC-3.1□□□□□ -2.91
VCANP13611 MIR513B-201ENST00000385136 84 ntBASIC-3.1□□□□□ -2.91
VCANP13611 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-3.1□□□□□ -2.91
VCANP13611 SNORA19.1-201ENST00000410656 129 ntBASIC-3.1□□□□□ -2.91
VCANP13611 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-3.1□□□□□ -2.91
VCANP13611 RNU2-62P-201ENST00000410868 191 ntBASIC-3.1□□□□□ -2.91
VCANP13611 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-3.1□□□□□ -2.91
VCANP13611 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-3.11□□□□□ -2.91
VCANP13611 MTCO3P19-201ENST00000415864 321 ntBASIC-3.11□□□□□ -2.91
VCANP13611 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-3.11□□□□□ -2.91
VCANP13611 ACA59.1-201ENST00000515966 143 ntBASIC-3.11□□□□□ -2.91
VCANP13611 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.11□□□□□ -2.91
VCANP13611 Y_RNA.15-201ENST00000362420 102 ntBASIC-3.11□□□□□ -2.91
VCANP13611 Y_RNA.33-201ENST00000362591 102 ntBASIC-3.11□□□□□ -2.91
VCANP13611 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.11□□□□□ -2.91
VCANP13611 RNU6-1052P-201ENST00000411398 104 ntBASIC-3.11□□□□□ -2.91
VCANP13611 RNU6-719P-201ENST00000516671 104 ntBASIC-3.11□□□□□ -2.91
VCANP13611 AC087752.4-201ENST00000605911 462 ntBASIC-3.11□□□□□ -2.91
VCANP13611 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-3.11□□□□□ -2.91
VCANP13611 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.11□□□□□ -2.91
VCANP13611 AL590004.1-201ENST00000405321 300 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AC026410.2-201ENST00000460281 156 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AC091179.3-201ENST00000474761 144 ntBASIC-3.12□□□□□ -2.91
VCANP13611 TRAJ51-201ENST00000504127 63 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AC010598.1-201ENST00000510378 103 ntBASIC-3.12□□□□□ -2.91
VCANP13611 Y_RNA.368-201ENST00000365547 113 ntBASIC-3.12□□□□□ -2.91
VCANP13611 RNU6-762P-201ENST00000517107 102 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AL512360.1-201ENST00000555346 234 ntBASIC-3.12□□□□□ -2.91
VCANP13611 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.12□□□□□ -2.91
VCANP13611 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.12□□□□□ -2.91
VCANP13611 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.12□□□□□ -2.91
VCANP13611 MTND4P25-201ENST00000441039 533 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AC015724.1-201ENST00000478577 156 ntBASIC-3.12□□□□□ -2.91
VCANP13611 AC008507.2-201ENST00000588402 1176 ntBASIC-3.12□□□□□ -2.91
VCANP13611 Y_RNA.110-201ENST00000363220 99 ntBASIC-3.13□□□□□ -2.91
VCANP13611 RNU6-668P-201ENST00000364180 107 ntBASIC-3.13□□□□□ -2.91
VCANP13611 RNU6-530P-201ENST00000391180 107 ntBASIC-3.13□□□□□ -2.91
VCANP13611 RNU6-995P-201ENST00000391244 107 ntBASIC-3.13□□□□□ -2.91
VCANP13611 ELOCP4-201ENST00000420090 333 ntBASIC-3.13□□□□□ -2.91
VCANP13611 Y_RNA.159-201ENST00000363674 87 ntBASIC-3.13□□□□□ -2.91
VCANP13611 MTCO2P27-201ENST00000420740 428 ntBASIC-3.13□□□□□ -2.91
VCANP13611 TCL6_2.1-201ENST00000615162 119 ntBASIC-3.13□□□□□ -2.91
VCANP13611 MTND5P42-201ENST00000637720 498 ntBASIC-3.13□□□□□ -2.91
VCANP13611 MIR581-201ENST00000384895 96 ntBASIC-3.14□□□□□ -2.91
VCANP13611 MIR1305-201ENST00000408300 86 ntBASIC-3.14□□□□□ -2.91
VCANP13611 MTND1P2-201ENST00000430604 821 ntBASIC-3.14□□□□□ -2.91
VCANP13611 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.14□□□□□ -2.91
VCANP13611 U6.96-201ENST00000636425 70 ntBASIC-3.14□□□□□ -2.91
VCANP13611 RNU6-777P-201ENST00000364265 104 ntBASIC-3.14□□□□□ -2.91
VCANP13611 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.14□□□□□ -2.91
VCANP13611 RNU6-136P-201ENST00000384663 107 ntBASIC-3.14□□□□□ -2.91
VCANP13611 AC004866.1-201ENST00000411748 78 ntBASIC-3.14□□□□□ -2.91
VCANP13611 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.14□□□□□ -2.91
VCANP13611 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.14□□□□□ -2.91
VCANP13611 Y_RNA.623-201ENST00000411128 95 ntBASIC-3.14□□□□□ -2.91
VCANP13611 MTCO2P11-201ENST00000431069 680 ntBASIC-3.14□□□□□ -2.91
VCANP13611 MRPS10P1-201ENST00000448483 130 ntBASIC-3.15□□□□□ -2.91
VCANP13611 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.15□□□□□ -2.91
VCANP13611 MIR1254-1-201ENST00000408257 97 ntBASIC-3.15□□□□□ -2.91
VCANP13611 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.15□□□□□ -2.91
VCANP13611 AC004386.2-201ENST00000441858 148 ntBASIC-3.15□□□□□ -2.91
VCANP13611 AC023449.1-201ENST00000454464 154 ntBASIC-3.15□□□□□ -2.91
VCANP13611 RNU6-266P-201ENST00000364225 107 ntBASIC-3.15□□□□□ -2.91
VCANP13611 MIR216B-201ENST00000390186 82 ntBASIC-3.15□□□□□ -2.91
VCANP13611 RNU6-559P-201ENST00000516151 98 ntBASIC-3.15□□□□□ -2.91
VCANP13611 AC005972.2-201ENST00000604690 348 ntBASIC-3.15□□□□□ -2.91
VCANP13611 MIR548O2-201ENST00000616090 70 ntBASIC-3.15□□□□□ -2.91
VCANP13611 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-3.15□□□□□ -2.91
VCANP13611 SUMO2P5-201ENST00000506790 245 ntBASIC-3.16□□□□□ -2.92
VCANP13611 RNU6-552P-201ENST00000362869 119 ntBASIC-3.16□□□□□ -2.92
VCANP13611 AL009048.1-201ENST00000450437 298 ntBASIC-3.16□□□□□ -2.92
VCANP13611 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.16□□□□□ -2.92
VCANP13611 RNU6-696P-201ENST00000390834 107 ntBASIC-3.17□□□□□ -2.92
VCANP13611 MTND3P4-201ENST00000453537 303 ntBASIC-3.17□□□□□ -2.92
VCANP13611 RNU6-830P-201ENST00000516353 107 ntBASIC-3.17□□□□□ -2.92
VCANP13611 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.17□□□□□ -2.92
VCANP13611 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.17□□□□□ -2.92
VCANP13611 SNORD60-201ENST00000383903 83 ntBASIC-3.17□□□□□ -2.92
VCANP13611 MIR522-201ENST00000385071 87 ntBASIC-3.17□□□□□ -2.92
VCANP13611 AC019178.2-201ENST00000423595 505 ntBASIC-3.18□□□□□ -2.92
VCANP13611 RNU6-867P-201ENST00000364956 107 ntBASIC-3.18□□□□□ -2.92
VCANP13611 RNU6-1316P-201ENST00000384242 108 ntBASIC-3.18□□□□□ -2.92
VCANP13611 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-3.18□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms