Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-958P-201ENST00000516995 106 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.01□□□□□ -2.09
COL6A2P12110 MIR4679-2-201ENST00000578358 77 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL6A2P12110 Y_RNA.35-201ENST00000362601 101 ntBASIC2□□□□□ -2.09
COL6A2P12110 MIR548A1-201ENST00000385041 97 ntBASIC2□□□□□ -2.09
COL6A2P12110 MIR764-201ENST00000390811 85 ntBASIC2□□□□□ -2.09
COL6A2P12110 RNA5SP144-201ENST00000410846 116 ntBASIC2□□□□□ -2.09
COL6A2P12110 AL603825.1-201ENST00000438481 80 ntBASIC2□□□□□ -2.09
COL6A2P12110 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2□□□□□ -2.09
COL6A2P12110 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
COL6A2P12110 RNU2-35P-201ENST00000516446 142 ntBASIC2□□□□□ -2.09
COL6A2P12110 DNAJC19P9-201ENST00000555084 351 ntBASIC2□□□□□ -2.09
COL6A2P12110 MIR3152-201ENST00000579801 74 ntBASIC2□□□□□ -2.09
COL6A2P12110 AC106754.2-201ENST00000623006 233 ntBASIC2□□□□□ -2.09
COL6A2P12110 Y_RNA.213-201ENST00000364178 111 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 Y_RNA.281-201ENST00000364774 94 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 RNU6-439P-201ENST00000384188 106 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 RNA5SP261-201ENST00000410536 106 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 RN7SKP223-201ENST00000410582 62 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 RNU7-123P-201ENST00000515911 60 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 AC015688.6-201ENST00000577737 104 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.99□□□□□ -2.09
COL6A2P12110 RNY4P6-201ENST00000363667 96 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 Y_RNA.430-201ENST00000384081 110 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 MIR759-201ENST00000390224 91 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL6A2P12110 SNORA26.6-201ENST00000391256 115 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 POLR2J4-204ENST00000418424 324 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 snoU13.16-201ENST00000459350 104 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 PDCD5P2-201ENST00000507570 312 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 AC007012.1-201ENST00000567192 175 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 MIR4764-201ENST00000580680 88 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 AL513534.2-201ENST00000603836 250 ntBASIC1.98□□□□□ -2.09
COL6A2P12110 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
COL6A2P12110 AL023284.1-201ENST00000403956 276 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 AL022718.1-201ENST00000412004 84 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 RNU6-548P-201ENST00000517083 115 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
COL6A2P12110 AL020996.3-201ENST00000606617 222 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 MIR8055-201ENST00000610739 97 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
COL6A2P12110 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RNU4-16P-201ENST00000364737 141 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RNA5SP259-201ENST00000365541 109 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 SNORA22-201ENST00000383907 134 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 SNORA51.10-201ENST00000384418 136 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RNU6-1104P-201ENST00000384723 104 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 MIR520C-201ENST00000385005 87 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 MT-TI-201ENST00000387365 69 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RNU6-913P-201ENST00000390913 95 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 AL451046.2-201ENST00000403074 277 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 RNU6-412P-201ENST00000516434 106 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 AC103810.8-201ENST00000607347 118 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL6A2P12110 MIR6717-201ENST00000622747 73 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 AC008133.2-201ENST00000624540 351 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 MIR6841-201ENST00000637129 72 ntBASIC1.96□□□□□ -2.1
COL6A2P12110 SNORD115-2-201ENST00000362842 82 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 RNU6-153P-201ENST00000364422 104 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 SNORD115-20-201ENST00000365099 82 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 RNU7-45P-201ENST00000459460 63 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 AC004812.1-201ENST00000540773 146 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
COL6A2P12110 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
COL6A2P12110 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
COL6A2P12110 Y_RNA.531-201ENST00000384589 121 ntBASIC1.94□□□□□ -2.1
COL6A2P12110 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
COL6A2P12110 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
COL6A2P12110 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL6A2P12110 AL391516.1-201ENST00000554380 2449 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 Y_RNA.85-201ENST00000363014 111 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 AL512326.2-201ENST00000426359 151 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.93□□□□□ -2.1
COL6A2P12110 MIR3163-201ENST00000581592 73 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
COL6A2P12110 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.92□□□□□ -2.1
COL6A2P12110 SNORA22.1-201ENST00000362701 134 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 Y_RNA.299-201ENST00000364973 94 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 SNORD41-201ENST00000386967 70 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 RNA5SP247-201ENST00000411181 105 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 RPS23P4-201ENST00000487908 423 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
COL6A2P12110 Z97988.1-201ENST00000637697 135 ntBASIC1.92□□□□□ -2.1
COL6A2P12110 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A2P12110 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms