Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNY3P13-201ENST00000365542 102 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 RNU6-564P-201ENST00000410983 104 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 RNU6-1238P-201ENST00000517215 102 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 AL391262.2-201ENST00000622466 494 ntBASIC-3.92□□□□□ -3.04
TOP2AP11388 AC113618.1-201ENST00000416747 285 ntBASIC-3.93□□□□□ -3.04
TOP2AP11388 RNU7-79P-201ENST00000516082 62 ntBASIC-3.93□□□□□ -3.04
TOP2AP11388 RNU7-25P-201ENST00000516544 62 ntBASIC-3.93□□□□□ -3.04
TOP2AP11388 PIGPP4-201ENST00000584447 307 ntBASIC-3.93□□□□□ -3.04
TOP2AP11388 AC008507.4-201ENST00000585464 127 ntBASIC-3.93□□□□□ -3.04
TOP2AP11388 SNORD115-8-201ENST00000363856 82 ntBASIC-3.94□□□□□ -3.04
TOP2AP11388 MTND1P34-201ENST00000438556 671 ntBASIC-3.94□□□□□ -3.04
TOP2AP11388 AC091179.3-201ENST00000474761 144 ntBASIC-3.94□□□□□ -3.04
TOP2AP11388 RNU6-1337P-201ENST00000516525 95 ntBASIC-3.94□□□□□ -3.04
TOP2AP11388 AC144568.1-201ENST00000520139 137 ntBASIC-3.94□□□□□ -3.04
TOP2AP11388 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-3.95□□□□□ -3.04
TOP2AP11388 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 AL035461.1-201ENST00000421490 332 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 UBE2V1P12-201ENST00000503954 474 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 RNU6-1198P-201ENST00000516904 67 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 FAS-AS1.1-201ENST00000615327 126 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 MIR548O2-201ENST00000616090 70 ntBASIC-3.95□□□□□ -3.04
TOP2AP11388 SNORD115-38-201ENST00000365037 82 ntBASIC-3.96□□□□□ -3.04
TOP2AP11388 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.96□□□□□ -3.04
TOP2AP11388 AC005828.6-201ENST00000606610 232 ntBASIC-3.96□□□□□ -3.04
TOP2AP11388 AL603910.2-201ENST00000407268 136 ntBASIC-3.97□□□□□ -3.05
TOP2AP11388 RNU7-140P-201ENST00000459546 60 ntBASIC-3.97□□□□□ -3.05
TOP2AP11388 RNU6-150P-201ENST00000516237 95 ntBASIC-3.97□□□□□ -3.05
TOP2AP11388 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.98□□□□□ -3.05
TOP2AP11388 Y_RNA.366-201ENST00000365540 102 ntBASIC-3.98□□□□□ -3.05
TOP2AP11388 SNORD72-201ENST00000390994 80 ntBASIC-3.98□□□□□ -3.05
TOP2AP11388 Y_RNA.179-201ENST00000363844 90 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 Y_RNA.242-201ENST00000364473 110 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 RNU4-17P-201ENST00000365598 141 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 RNU6-767P-201ENST00000384132 107 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 SNORA72-201ENST00000384339 132 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.99□□□□□ -3.05
TOP2AP11388 SNORD70.1-201ENST00000391007 85 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 SNORD63B-201ENST00000411005 70 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 AP000542.1-201ENST00000448473 371 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 RNU7-45P-201ENST00000459460 63 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 MTND4LP18-201ENST00000526864 291 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 MIR23C-201ENST00000579846 100 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 JPX_2.1-201ENST00000614161 69 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 U6.96-201ENST00000636425 70 ntBASIC-3.99□□□□□ -3.05
TOP2AP11388 RNU6-774P-201ENST00000363238 107 ntBASIC-4□□□□□ -3.05
TOP2AP11388 MIR216B-201ENST00000390186 82 ntBASIC-4□□□□□ -3.05
TOP2AP11388 MIR548I2-201ENST00000408348 149 ntBASIC-4□□□□□ -3.05
TOP2AP11388 MIR3129-201ENST00000581095 76 ntBASIC-4□□□□□ -3.05
TOP2AP11388 snoU109.3-201ENST00000459477 145 ntBASIC-4□□□□□ -3.05
TOP2AP11388 MIR4500-201ENST00000579472 76 ntBASIC-4□□□□□ -3.05
TOP2AP11388 AC084781.2-201ENST00000615568 161 ntBASIC-4□□□□□ -3.05
TOP2AP11388 AL359880.1-201ENST00000621879 266 ntBASIC-4□□□□□ -3.05
TOP2AP11388 Y_RNA.380-201ENST00000365663 111 ntBASIC-4.01□□□□□ -3.05
TOP2AP11388 RNU6-938P-201ENST00000411285 103 ntBASIC-4.01□□□□□ -3.05
TOP2AP11388 RNU6-415P-201ENST00000516252 97 ntBASIC-4.01□□□□□ -3.05
TOP2AP11388 AC124303.1-201ENST00000605703 360 ntBASIC-4.01□□□□□ -3.05
TOP2AP11388 Y_RNA.222-201ENST00000364264 102 ntBASIC-4.02□□□□□ -3.05
TOP2AP11388 MIR450B-201ENST00000401182 78 ntBASIC-4.02□□□□□ -3.05
TOP2AP11388 RNU6-101P-201ENST00000410323 104 ntBASIC-4.02□□□□□ -3.05
TOP2AP11388 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-4.02□□□□□ -3.05
TOP2AP11388 RNU7-96P-201ENST00000459535 64 ntBASIC-4.02□□□□□ -3.05
TOP2AP11388 AC090617.8-201ENST00000623339 167 ntBASIC-4.02□□□□□ -3.05
TOP2AP11388 RNU6-353P-201ENST00000364266 108 ntBASIC-4.03□□□□□ -3.05
TOP2AP11388 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-4.03□□□□□ -3.05
TOP2AP11388 Y_RNA.171-201ENST00000363760 102 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 RNU6-1310P-201ENST00000384153 107 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 RNU4-70P-201ENST00000384579 139 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 RNU2-42P-201ENST00000410697 113 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-4.04□□□□□ -3.06
TOP2AP11388 MIR548W-201ENST00000581970 74 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.812-201ENST00000610788 101 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.784-201ENST00000613803 101 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 SNX3P1Y-201ENST00000615757 176 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.787-201ENST00000616522 101 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.780-201ENST00000617336 101 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.801-201ENST00000619005 101 ntBASIC-4.04□□□□□ -3.06
TOP2AP11388 Y_RNA.207-201ENST00000364142 106 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 SNORA63.6-201ENST00000364921 119 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 RNU6-1152P-201ENST00000384576 107 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 AC108729.2-201ENST00000476543 840 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 AC132825.7-201ENST00000638744 335 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 snoU13.10-201ENST00000459301 103 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 RNU7-106P-201ENST00000459514 67 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 AC120024.2-201ENST00000576526 175 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 AC098479.1-201ENST00000609225 154 ntBASIC-4.05□□□□□ -3.06
TOP2AP11388 MIR302B-201ENST00000362188 73 ntBASIC-4.06□□□□□ -3.06
TOP2AP11388 Y_RNA.157-201ENST00000363638 102 ntBASIC-4.06□□□□□ -3.06
TOP2AP11388 Y_RNA.358-201ENST00000365491 99 ntBASIC-4.06□□□□□ -3.06
TOP2AP11388 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-4.06□□□□□ -3.06
TOP2AP11388 AC006566.1-201ENST00000608943 513 ntBASIC-4.06□□□□□ -3.06
TOP2AP11388 RNU6-280P-201ENST00000364145 104 ntBASIC-4.07□□□□□ -3.06
TOP2AP11388 Y_RNA.470-201ENST00000384307 117 ntBASIC-4.07□□□□□ -3.06
TOP2AP11388 MTCO3P42-201ENST00000509488 518 ntBASIC-4.07□□□□□ -3.06
TOP2AP11388 RNU6-612P-201ENST00000516909 102 ntBASIC-4.07□□□□□ -3.06
TOP2AP11388 MIR342-201ENST00000362212 99 ntBASIC-4.08□□□□□ -3.06
TOP2AP11388 RNU6-1209P-201ENST00000363655 107 ntBASIC-4.08□□□□□ -3.06
TOP2AP11388 RNU6-1163P-201ENST00000364516 107 ntBASIC-4.08□□□□□ -3.06
TOP2AP11388 SNORD115-31-201ENST00000365318 82 ntBASIC-4.08□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 821.1 ms