Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
THBS1P07996 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
THBS1P07996 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
THBS1P07996 AC005336.3-201ENST00000623833 2679 ntBASIC2.73□□□□□ -1.97
THBS1P07996 RNU6-1094P-201ENST00000362416 104 ntBASIC2.73□□□□□ -1.97
THBS1P07996 RNU6-1229P-201ENST00000364295 107 ntBASIC2.73□□□□□ -1.97
THBS1P07996 RNU6-1321P-201ENST00000390905 107 ntBASIC2.73□□□□□ -1.97
THBS1P07996 RNU6-129P-201ENST00000391022 107 ntBASIC2.73□□□□□ -1.97
THBS1P07996 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
THBS1P07996 RN7SL499P-201ENST00000481141 276 ntBASIC2.73□□□□□ -1.97
THBS1P07996 SCARNA16.3-201ENST00000516595 184 ntBASIC2.73□□□□□ -1.97
THBS1P07996 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
THBS1P07996 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
THBS1P07996 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
THBS1P07996 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
THBS1P07996 MIR181B2-201ENST00000385004 89 ntBASIC2.72□□□□□ -1.97
THBS1P07996 RNA5SP465-201ENST00000391195 109 ntBASIC2.72□□□□□ -1.97
THBS1P07996 BX510359.4-201ENST00000423750 193 ntBASIC2.72□□□□□ -1.97
THBS1P07996 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
THBS1P07996 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
THBS1P07996 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
THBS1P07996 RNU6-590P-201ENST00000365039 107 ntBASIC2.71□□□□□ -1.98
THBS1P07996 MIR526A1-201ENST00000384897 85 ntBASIC2.71□□□□□ -1.98
THBS1P07996 MIR627-201ENST00000384979 97 ntBASIC2.71□□□□□ -1.98
THBS1P07996 RNU11-3P-201ENST00000391111 133 ntBASIC2.71□□□□□ -1.98
THBS1P07996 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
THBS1P07996 RN7SKP132-201ENST00000516001 208 ntBASIC2.71□□□□□ -1.98
THBS1P07996 RNA5SP137-201ENST00000516833 135 ntBASIC2.71□□□□□ -1.98
THBS1P07996 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.71□□□□□ -1.98
THBS1P07996 AC021506.2-201ENST00000612354 169 ntBASIC2.71□□□□□ -1.98
THBS1P07996 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
THBS1P07996 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
THBS1P07996 HSBP1P2-201ENST00000299671 229 ntBASIC2.7□□□□□ -1.98
THBS1P07996 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
THBS1P07996 UBE2DNL-203ENST00000474922 222 ntBASIC2.7□□□□□ -1.98
THBS1P07996 AC133485.1-201ENST00000567176 124 ntBASIC2.7□□□□□ -1.98
THBS1P07996 AP000753.3-201ENST00000604083 169 ntBASIC2.7□□□□□ -1.98
THBS1P07996 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.7□□□□□ -1.98
THBS1P07996 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
THBS1P07996 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
THBS1P07996 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
THBS1P07996 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
THBS1P07996 snoU13.27-201ENST00000459278 104 ntBASIC2.69□□□□□ -1.98
THBS1P07996 RPS29P11-201ENST00000496507 171 ntBASIC2.69□□□□□ -1.98
THBS1P07996 RPL23AP94-201ENST00000512518 302 ntBASIC2.69□□□□□ -1.98
THBS1P07996 MIR4672-201ENST00000583126 81 ntBASIC2.69□□□□□ -1.98
THBS1P07996 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.69□□□□□ -1.98
THBS1P07996 AC105081.1-201ENST00000617727 106 ntBASIC2.69□□□□□ -1.98
THBS1P07996 AC006386.2-201ENST00000624491 75 ntBASIC2.69□□□□□ -1.98
THBS1P07996 AC008133.2-201ENST00000624540 351 ntBASIC2.69□□□□□ -1.98
THBS1P07996 AC012005.1-201ENST00000624575 75 ntBASIC2.69□□□□□ -1.98
THBS1P07996 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
THBS1P07996 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
THBS1P07996 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
THBS1P07996 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
THBS1P07996 MIR424-201ENST00000362227 98 ntBASIC2.68□□□□□ -1.98
THBS1P07996 RNU1-91P-201ENST00000364746 163 ntBASIC2.68□□□□□ -1.98
THBS1P07996 SNORA2B-201ENST00000384583 137 ntBASIC2.68□□□□□ -1.98
THBS1P07996 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
THBS1P07996 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
THBS1P07996 MIR8066-201ENST00000617280 78 ntBASIC2.68□□□□□ -1.98
THBS1P07996 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
THBS1P07996 SNORD38B-201ENST00000384690 67 ntBASIC2.67□□□□□ -1.98
THBS1P07996 MIR512-1-201ENST00000384913 84 ntBASIC2.67□□□□□ -1.98
THBS1P07996 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
THBS1P07996 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
THBS1P07996 AC114801.3-201ENST00000510231 177 ntBASIC2.67□□□□□ -1.98
THBS1P07996 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.67□□□□□ -1.98
THBS1P07996 SNORA25.13-201ENST00000516395 103 ntBASIC2.67□□□□□ -1.98
THBS1P07996 AC006023.1-201ENST00000603944 259 ntBASIC2.67□□□□□ -1.98
THBS1P07996 SNORD38B-202ENST00000625943 69 ntBASIC2.67□□□□□ -1.98
THBS1P07996 AC131280.1-202ENST00000624067 4211 ntBASIC2.67□□□□□ -1.98
THBS1P07996 RNA5SP133-201ENST00000363368 119 ntBASIC2.66□□□□□ -1.98
THBS1P07996 MIR597-201ENST00000384968 97 ntBASIC2.66□□□□□ -1.98
THBS1P07996 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
THBS1P07996 RNA5SP237-201ENST00000410414 113 ntBASIC2.66□□□□□ -1.98
THBS1P07996 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.66□□□□□ -1.98
THBS1P07996 AL512598.1-201ENST00000610158 273 ntBASIC2.66□□□□□ -1.98
THBS1P07996 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
THBS1P07996 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
THBS1P07996 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
THBS1P07996 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
THBS1P07996 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.99
THBS1P07996 RNU6-557P-201ENST00000516842 110 ntBASIC2.65□□□□□ -1.99
THBS1P07996 MIR4764-201ENST00000580680 88 ntBASIC2.65□□□□□ -1.99
THBS1P07996 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.65□□□□□ -1.99
THBS1P07996 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.65□□□□□ -1.99
THBS1P07996 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
THBS1P07996 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
THBS1P07996 AC009487.2-201ENST00000420969 6821 ntBASIC2.65□□□□□ -1.99
THBS1P07996 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
THBS1P07996 RNU6-624P-201ENST00000363411 107 ntBASIC2.64□□□□□ -1.99
THBS1P07996 RNY1P2-201ENST00000364820 117 ntBASIC2.64□□□□□ -1.99
THBS1P07996 RNY1P13-201ENST00000365030 105 ntBASIC2.64□□□□□ -1.99
THBS1P07996 SNORA40.18-201ENST00000391200 128 ntBASIC2.64□□□□□ -1.99
THBS1P07996 AC087499.7-201ENST00000441958 109 ntBASIC2.64□□□□□ -1.99
THBS1P07996 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
THBS1P07996 snoU13.11-201ENST00000459219 104 ntBASIC2.64□□□□□ -1.99
THBS1P07996 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
THBS1P07996 SUB1P4-201ENST00000566062 339 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms