Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
COL4A1P02462 RNU6-1205P-201ENST00000363625 106 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.293-201ENST00000364908 93 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORA63.7-201ENST00000365579 123 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MIR802-201ENST00000390235 94 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MIR938-201ENST00000401216 83 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MTND4P19-201ENST00000446659 478 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MTND3P22-201ENST00000510932 243 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU6-976P-201ENST00000516086 111 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU6-897P-201ENST00000517135 105 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.11□□□□□ -2.39
COL4A1P02462 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.11□□□□□ -2.39
COL4A1P02462 MIR4676-201ENST00000583078 72 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
COL4A1P02462 MIR369-201ENST00000362155 70 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.14-201ENST00000362415 103 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.66-201ENST00000362862 102 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORD118-201ENST00000363593 134 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU4-10P-201ENST00000364383 140 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU6-806P-201ENST00000365147 105 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU6-1138P-201ENST00000365359 106 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.376-201ENST00000365638 108 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNY1P8-201ENST00000383970 114 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.410-201ENST00000383992 113 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORD61-201ENST00000384252 73 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.526-201ENST00000384572 110 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.569-201ENST00000384749 103 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORD77.3-201ENST00000391113 65 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORA53-201ENST00000391141 249 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORD100-201ENST00000408573 76 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 HMGN2P22-201ENST00000427588 175 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 SNORD19B-201ENST00000459623 84 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 RNU6-1143P-201ENST00000516125 104 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.715-201ENST00000517082 110 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.11□□□□□ -2.39
COL4A1P02462 MIR4795-201ENST00000584182 89 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 PART1_1.1-201ENST00000611761 217 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 MIR6740-201ENST00000618268 113 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Z97988.1-201ENST00000637697 135 ntBASIC0.11□□□□□ -2.39
COL4A1P02462 Y_RNA.7-201ENST00000362352 102 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 Y_RNA.31-201ENST00000362574 102 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 Y_RNA.418-201ENST00000384029 102 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 Y_RNA.419-201ENST00000384041 102 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNY3P14-201ENST00000384309 102 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 MIR548A2-201ENST00000384956 97 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNU6-913P-201ENST00000390913 95 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNU6-121P-201ENST00000410525 99 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNU6-938P-201ENST00000411285 103 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 AC015818.7-201ENST00000428754 109 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 AC087499.7-201ENST00000441958 109 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 RNU6-191P-201ENST00000516295 94 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 AP000942.4-201ENST00000604811 241 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 AL133255.1-201ENST00000606374 441 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 uc_338.6-201ENST00000613544 171 ntBASIC0.1□□□□□ -2.39
COL4A1P02462 MIR377-201ENST00000362145 69 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 MIR302B-201ENST00000362188 73 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 Y_RNA.70-201ENST00000362886 110 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 Y_RNA.152-201ENST00000363578 100 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 Y_RNA.183-201ENST00000363882 113 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 Y_RNA.263-201ENST00000364659 114 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 SNORD42.2-201ENST00000365570 69 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 Y_RNA.541-201ENST00000384640 113 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 MIR626-201ENST00000385032 94 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 SNORD12C-201ENST00000386307 89 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 RPL21P38-201ENST00000418090 167 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 RNU7-62P-201ENST00000458856 62 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 RNU6-397P-201ENST00000516226 104 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 RNU6-1338P-201ENST00000516328 91 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 RNU6-126P-201ENST00000516685 103 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 AC078938.1-201ENST00000620993 318 ntBASIC0.09□□□□□ -2.39
COL4A1P02462 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.4
COL4A1P02462 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
COL4A1P02462 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 Y_RNA.26-201ENST00000362539 101 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 snoU2_19.2-201ENST00000363024 80 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 Y_RNA.128-201ENST00000363391 112 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 SNORA1.1-201ENST00000364671 133 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 Y_RNA.380-201ENST00000365663 111 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 SNORD93-201ENST00000408813 74 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 SNORA40.8-201ENST00000411034 126 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 Y_RNA.631-201ENST00000459607 101 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RPS29P24-201ENST00000486345 171 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 SNORD77.4-201ENST00000516158 81 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RNY3P15-201ENST00000516297 97 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RNU6-453P-201ENST00000516819 85 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
COL4A1P02462 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.08□□□□□ -2.4
COL4A1P02462 AL021707.8-201ENST00000609428 183 ntBASIC0.08□□□□□ -2.4
COL4A1P02462 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms