Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-109P-201ENST00000516364 107 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 RNU6-184P-201ENST00000516514 107 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 SNORD45.4-201ENST00000516629 73 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 RNU6-341P-201ENST00000516973 96 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 AC006254.2-201ENST00000603259 279 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 AL513534.2-201ENST00000603836 250 ntBASIC1.41□□□□□ -2.18
COL2A1P02458 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL2A1P02458 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
COL2A1P02458 RNU6-888P-201ENST00000363010 101 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 SNORA16B-201ENST00000364674 135 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 MIRLET7F2-201ENST00000385277 83 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 SNORA19.1-201ENST00000410656 129 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.4□□□□□ -2.19
COL2A1P02458 FTH1P12-201ENST00000432137 551 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 Y_RNA.677-201ENST00000516401 85 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 SNORA48.11-201ENST00000517015 89 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 SUMO2P16-201ENST00000519475 264 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 AC022523.2-201ENST00000561045 150 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 MIR4662B-201ENST00000579498 81 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 AL035470.1-201ENST00000622571 220 ntBASIC1.4□□□□□ -2.19
COL2A1P02458 Y_RNA.68-201ENST00000362881 102 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 RNU6-414P-201ENST00000363705 104 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 RNU6-690P-201ENST00000365242 106 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 Y_RNA.351-201ENST00000365436 96 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 SNORD12C-201ENST00000386307 89 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 RNU6-938P-201ENST00000411285 103 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 MTATP6P21-201ENST00000440681 189 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 AC114811.1-201ENST00000507207 168 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.39□□□□□ -2.19
COL2A1P02458 AC015726.2-201ENST00000620112 122 ntBASIC1.39□□□□□ -2.19
COL2A1P02458 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL2A1P02458 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNA5SP457-201ENST00000363657 124 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 SNORD14E-201ENST00000364009 85 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-1131P-201ENST00000364955 107 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-1189P-201ENST00000383958 107 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-880P-201ENST00000384526 107 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 MIR597-201ENST00000384968 97 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-440P-201ENST00000390882 105 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 U8.17-201ENST00000391292 132 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 STAG3L5P-204ENST00000443759 179 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 AC093850.1-201ENST00000454121 251 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU7-45P-201ENST00000459460 63 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-830P-201ENST00000516353 107 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 RNY4P20-201ENST00000516678 93 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 SNORA18.7-201ENST00000516910 131 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 MIR5094-201ENST00000578766 85 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 MIR3616-201ENST00000584070 92 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
COL2A1P02458 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
COL2A1P02458 RNU6-23P-201ENST00000363283 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 SNORD115-28-201ENST00000363931 81 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-1292P-201ENST00000383856 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-756P-201ENST00000383997 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 SNORA51.5-201ENST00000384126 131 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-163P-201ENST00000384396 106 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-160P-201ENST00000384591 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 MIR216A-201ENST00000385063 110 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU11-3P-201ENST00000391111 133 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.37□□□□□ -2.19
COL2A1P02458 RNU7-70P-201ENST00000516941 66 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU7-181P-201ENST00000517234 74 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.37□□□□□ -2.19
COL2A1P02458 MIR3169-201ENST00000578032 83 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AC021443.1-201ENST00000604478 211 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AL449363.1-201ENST00000617815 186 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AC134878.1-201ENST00000619901 243 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-32P-201ENST00000383948 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-13P-201ENST00000384248 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-905P-201ENST00000384434 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-12P-201ENST00000384604 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNU6-41P-201ENST00000384741 107 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RNY1P7-201ENST00000384743 110 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 RPL31P63-201ENST00000422565 375 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 SNORA31.10-201ENST00000516482 106 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 Y_RNA.714-201ENST00000517065 90 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 AP002004.2-201ENST00000531656 154 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 SUB1P4-201ENST00000566062 339 ntBASIC1.37□□□□□ -2.19
COL2A1P02458 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL2A1P02458 RNU6-349P-201ENST00000362402 107 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 Y_RNA.85-201ENST00000363014 111 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 SNORD73B-201ENST00000364394 72 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 SNORD24-201ENST00000383884 75 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU6-1014P-201ENST00000383940 103 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU6-442P-201ENST00000383968 104 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU6-49P-201ENST00000384256 107 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 MIR570-201ENST00000384917 97 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 SNRPGP14-201ENST00000435400 219 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNA5SP233-201ENST00000459153 113 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RNU7-164P-201ENST00000459221 62 ntBASIC1.36□□□□□ -2.19
COL2A1P02458 RPL39P34-201ENST00000477141 156 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms