Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-126P-201ENST00000516685 103 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AC131281.1-201ENST00000522984 164 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AP003733.2-201ENST00000529409 171 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF4O95639 MIR548S-201ENST00000581352 82 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 AC037487.3-201ENST00000606668 112 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF4O95639 MIR924-201ENST00000638017 53 ntBASIC0.07□□□□□ -2.4
CPSF4O95639 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
CPSF4O95639 Y_RNA.91-201ENST00000363042 107 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 SNORA36.1-201ENST00000363424 132 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 Y_RNA.229-201ENST00000364347 113 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 RNU6-740P-201ENST00000364734 105 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 Y_RNA.389-201ENST00000383924 113 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 RNU6-1189P-201ENST00000383958 107 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 SNORA53-201ENST00000391141 249 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 SNORA26.6-201ENST00000391256 115 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 SNORD93-201ENST00000408813 74 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 RNU7-45P-201ENST00000459460 63 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.06□□□□□ -2.4
CPSF4O95639 SNORA40.15-201ENST00000516884 107 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 MIR5688-201ENST00000580619 83 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 Y_RNA.804-201ENST00000615262 101 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 AP001282.2-201ENST00000616149 309 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 MIR8066-201ENST00000617280 78 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 MIR6717-201ENST00000622747 73 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 AC010487.4-201ENST00000637027 61 ntBASIC0.06□□□□□ -2.4
CPSF4O95639 Y_RNA.42-201ENST00000362660 108 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 RNY1-201ENST00000364228 113 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 Y_RNA.634-201ENST00000364811 113 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 Y_RNA.410-201ENST00000383992 113 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 MIR644A-201ENST00000385262 94 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 RNU4-83P-201ENST00000410863 133 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 Y_RNA.617-201ENST00000410920 90 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 RPL21P38-201ENST00000418090 167 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 ELOCP20-201ENST00000422460 345 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 AL731563.1-201ENST00000442202 214 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 RNU6-863P-201ENST00000515989 104 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 RNU6-1299P-201ENST00000516316 100 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 AP003327.1-201ENST00000529684 127 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
CPSF4O95639 Y_RNA.16-201ENST00000362421 102 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNU6-770P-201ENST00000363929 105 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 Y_RNA.214-201ENST00000364201 112 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNU6-806P-201ENST00000365147 105 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNU6-597P-201ENST00000365620 102 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNU6-484P-201ENST00000384016 107 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNY3P14-201ENST00000384309 102 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 SNORA8.3-201ENST00000384679 139 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 MIR626-201ENST00000385032 94 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 MT-TD-201ENST00000387419 68 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 RNY3P15-201ENST00000516297 97 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 Y_RNA.721-201ENST00000517207 102 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 AC112693.2-201ENST00000556538 232 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.04□□□□□ -2.4
CPSF4O95639 MIR302B-201ENST00000362188 73 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.19-201ENST00000362462 99 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.26-201ENST00000362539 101 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.28-201ENST00000362554 111 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.304-201ENST00000365011 112 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 RNU6-211P-201ENST00000384047 107 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.508-201ENST00000384502 114 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 SNORA26-201ENST00000391286 122 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 RNU2-59P-201ENST00000410482 191 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 Y_RNA.622-201ENST00000411091 108 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 RNU2-55P-201ENST00000411146 174 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 AL512326.2-201ENST00000426359 151 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 SNRPGP8-201ENST00000454064 226 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 RNU6-469P-201ENST00000516253 101 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 AL662814.1-201ENST00000617364 121 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 MIR376A2-201ENST00000636782 80 ntBASIC0.03□□□□□ -2.4
CPSF4O95639 UBE2WP1-201ENST00000362030 340 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.13-201ENST00000362403 112 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RNU6-653P-201ENST00000363074 106 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RNU6-403P-201ENST00000363163 104 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.351-201ENST00000365436 96 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.432-201ENST00000384087 111 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 SNORA1-201ENST00000384107 130 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RNU6-474P-201ENST00000384243 107 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 MT-TT-201ENST00000387460 66 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 U8.15-201ENST00000390947 134 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RNA5SP237-201ENST00000410414 113 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RPL39P25-201ENST00000449384 154 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.02□□□□□ -2.41
CPSF4O95639 RNA5SP153-201ENST00000516498 76 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RNA5SP268-201ENST00000516828 124 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 MIR4514-201ENST00000581410 57 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 RN7SL793P-201ENST00000583259 296 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
CPSF4O95639 Y_RNA.32-201ENST00000362589 110 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.64-201ENST00000362845 102 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.152-201ENST00000363578 100 ntBASIC0.01□□□□□ -2.41
CPSF4O95639 Y_RNA.210-201ENST00000364161 110 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms