Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
LDB3O75112 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.46□□□□□ -2.18
LDB3O75112 AC063976.4-201ENST00000421971 163 ntBASIC1.46□□□□□ -2.18
LDB3O75112 PDCD5P2-201ENST00000507570 312 ntBASIC1.46□□□□□ -2.18
LDB3O75112 RNU6-830P-201ENST00000516353 107 ntBASIC1.46□□□□□ -2.18
LDB3O75112 RNY4P20-201ENST00000516678 93 ntBASIC1.46□□□□□ -2.18
LDB3O75112 SNORA18.7-201ENST00000516910 131 ntBASIC1.46□□□□□ -2.18
LDB3O75112 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.46□□□□□ -2.18
LDB3O75112 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.46□□□□□ -2.18
LDB3O75112 AL670379.3-201ENST00000605040 251 ntBASIC1.46□□□□□ -2.18
LDB3O75112 AL596211.1-201ENST00000569873 2277 ntBASIC1.45□□□□□ -2.18
LDB3O75112 Y_RNA.241-201ENST00000364470 117 ntBASIC1.45□□□□□ -2.18
LDB3O75112 SNORA22-201ENST00000383907 134 ntBASIC1.45□□□□□ -2.18
LDB3O75112 SNORD38C-201ENST00000384381 69 ntBASIC1.45□□□□□ -2.18
LDB3O75112 MIR548A3-201ENST00000385297 97 ntBASIC1.45□□□□□ -2.18
LDB3O75112 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
LDB3O75112 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
LDB3O75112 Y_RNA.649-201ENST00000459077 103 ntBASIC1.45□□□□□ -2.18
LDB3O75112 RNU2-35P-201ENST00000516446 142 ntBASIC1.45□□□□□ -2.18
LDB3O75112 SUMO2P16-201ENST00000519475 264 ntBASIC1.45□□□□□ -2.18
LDB3O75112 AC090821.2-201ENST00000523552 176 ntBASIC1.45□□□□□ -2.18
LDB3O75112 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
LDB3O75112 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LDB3O75112 RNU6-690P-201ENST00000365242 106 ntBASIC1.44□□□□□ -2.18
LDB3O75112 SNORA27-201ENST00000384323 126 ntBASIC1.44□□□□□ -2.18
LDB3O75112 SNORD116-21-201ENST00000384507 92 ntBASIC1.44□□□□□ -2.18
LDB3O75112 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
LDB3O75112 SNORA17.3-201ENST00000391159 129 ntBASIC1.44□□□□□ -2.18
LDB3O75112 RNU6-1190P-201ENST00000410811 104 ntBASIC1.44□□□□□ -2.18
LDB3O75112 AC087499.4-201ENST00000448505 178 ntBASIC1.44□□□□□ -2.18
LDB3O75112 RNU7-123P-201ENST00000515911 60 ntBASIC1.44□□□□□ -2.18
LDB3O75112 RNU6-237P-201ENST00000515985 71 ntBASIC1.44□□□□□ -2.18
LDB3O75112 RNU6-917P-201ENST00000516294 104 ntBASIC1.44□□□□□ -2.18
LDB3O75112 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
LDB3O75112 MIR548AR-201ENST00000582191 57 ntBASIC1.44□□□□□ -2.18
LDB3O75112 MIR4769-201ENST00000584126 77 ntBASIC1.44□□□□□ -2.18
LDB3O75112 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
LDB3O75112 AL035470.1-201ENST00000622571 220 ntBASIC1.44□□□□□ -2.18
LDB3O75112 AC106754.2-201ENST00000623006 233 ntBASIC1.44□□□□□ -2.18
LDB3O75112 WWP1P1-201ENST00000466609 2769 ntBASIC1.44□□□□□ -2.18
LDB3O75112 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNU1-133P-201ENST00000364867 167 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNY1P6-201ENST00000384193 109 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
LDB3O75112 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNU6-998P-201ENST00000515894 101 ntBASIC1.43□□□□□ -2.18
LDB3O75112 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
LDB3O75112 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
LDB3O75112 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
LDB3O75112 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
LDB3O75112 RNA5SP259-201ENST00000365541 109 ntBASIC1.42□□□□□ -2.18
LDB3O75112 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
LDB3O75112 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
LDB3O75112 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
LDB3O75112 RNU2-13P-201ENST00000515909 113 ntBASIC1.42□□□□□ -2.18
LDB3O75112 RNU6-113P-201ENST00000516653 101 ntBASIC1.42□□□□□ -2.18
LDB3O75112 RNU6-1258P-201ENST00000516911 111 ntBASIC1.42□□□□□ -2.18
LDB3O75112 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
LDB3O75112 AC021443.1-201ENST00000604478 211 ntBASIC1.42□□□□□ -2.18
LDB3O75112 MIR8063-201ENST00000621930 81 ntBASIC1.42□□□□□ -2.18
LDB3O75112 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.42□□□□□ -2.18
LDB3O75112 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-34-201ENST00000362441 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-12-201ENST00000362583 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD33-201ENST00000362761 85 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-29-201ENST00000362834 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-9-201ENST00000362912 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-21-201ENST00000362963 81 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-14-201ENST00000363090 81 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-13-201ENST00000363358 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-41-201ENST00000363608 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-11-201ENST00000363616 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-5-201ENST00000363633 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-39-201ENST00000363694 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-4-201ENST00000363810 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-16-201ENST00000363887 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-6-201ENST00000363942 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-42-201ENST00000364273 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 RNU6-755P-201ENST00000364400 103 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-15-201ENST00000364809 81 ntBASIC1.41□□□□□ -2.18
LDB3O75112 Y_RNA.298-201ENST00000364960 107 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-1-201ENST00000364961 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-26-201ENST00000365067 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-10-201ENST00000365073 81 ntBASIC1.41□□□□□ -2.18
LDB3O75112 Y_RNA.346-201ENST00000365385 112 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-43-201ENST00000365503 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-36-201ENST00000365629 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
LDB3O75112 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 RNU6-913P-201ENST00000390913 95 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
LDB3O75112 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
LDB3O75112 RNU2-11P-201ENST00000459191 187 ntBASIC1.41□□□□□ -2.18
LDB3O75112 RPS29P24-201ENST00000486345 171 ntBASIC1.41□□□□□ -2.18
LDB3O75112 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SNORD115-40-201ENST00000606510 82 ntBASIC1.41□□□□□ -2.18
LDB3O75112 uc_338.28-201ENST00000612082 187 ntBASIC1.41□□□□□ -2.18
LDB3O75112 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms