Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-860P-201ENST00000410860 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-1217P-201ENST00000411276 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-785P-201ENST00000411324 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RN7SL633P-201ENST00000488974 297 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 CYP3A52P-201ENST00000563326 91 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-90P-201ENST00000606352 106 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 U6.90-201ENST00000614007 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 U6.70-201ENST00000620287 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXA2O43364 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA2O43364 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA2O43364 RNU6-652P-201ENST00000365488 107 ntBASIC3.1□□□□□ -1.91
HOXA2O43364 HMGN2P35-201ENST00000412164 270 ntBASIC3.1□□□□□ -1.91
HOXA2O43364 AC008133.2-201ENST00000624540 351 ntBASIC3.1□□□□□ -1.91
HOXA2O43364 MIR4662A-201ENST00000637499 67 ntBASIC3.1□□□□□ -1.91
HOXA2O43364 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA2O43364 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA2O43364 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA2O43364 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HOXA2O43364 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HOXA2O43364 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA2O43364 SNORD114-10-201ENST00000363409 72 ntBASIC3.09□□□□□ -1.91
HOXA2O43364 MIR9-1-201ENST00000385198 89 ntBASIC3.09□□□□□ -1.91
HOXA2O43364 RNA5SP501-201ENST00000410990 112 ntBASIC3.09□□□□□ -1.91
HOXA2O43364 SPINT5P-201ENST00000448174 155 ntBASIC3.09□□□□□ -1.91
HOXA2O43364 RNU7-79P-201ENST00000516082 62 ntBASIC3.09□□□□□ -1.91
HOXA2O43364 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
HOXA2O43364 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA2O43364 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RNU1-52P-201ENST00000384190 164 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 HMGN2P39-201ENST00000398005 273 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RNU6-602P-201ENST00000411155 105 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA2O43364 RN7SL429P-201ENST00000479090 223 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RN7SL489P-201ENST00000486185 223 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RN7SL327P-201ENST00000488659 223 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 RN7SL853P-201ENST00000617250 223 ntBASIC3.08□□□□□ -1.92
HOXA2O43364 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA2O43364 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA2O43364 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA2O43364 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HOXA2O43364 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA2O43364 RNU6-457P-201ENST00000363999 107 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HOXA2O43364 SNORD109B-201ENST00000458961 67 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 SNORD109A-201ENST00000459128 67 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA2O43364 RNU7-137P-201ENST00000516788 62 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 MIR4764-201ENST00000580680 88 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 MIR5194-201ENST00000582634 120 ntBASIC3.07□□□□□ -1.92
HOXA2O43364 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA2O43364 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HOXA2O43364 RNU6-859P-201ENST00000362728 107 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 RNU1-51P-201ENST00000365345 176 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 MIR196B-201ENST00000384852 84 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 RNU6-1321P-201ENST00000390905 107 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 AL161932.1-201ENST00000437408 146 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 RNU7-48P-201ENST00000458875 63 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 AC234781.5-201ENST00000508429 271 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA2O43364 SNORD14A-201ENST00000606526 91 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 U1.36-201ENST00000620684 176 ntBASIC3.06□□□□□ -1.92
HOXA2O43364 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXA2O43364 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA2O43364 Y_RNA.98-201ENST00000363109 102 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 RNA5SP126-201ENST00000365092 109 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 AC108938.1-201ENST00000451204 136 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA2O43364 AC079600.2-201ENST00000550076 130 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 AC105081.1-201ENST00000617727 106 ntBASIC3.05□□□□□ -1.92
HOXA2O43364 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HOXA2O43364 RNA5SP138-201ENST00000365098 114 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 MIR520C-201ENST00000385005 87 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 AL138827.1-201ENST00000402666 306 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 RNA5SP21-201ENST00000410917 96 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 RNU1-98P-201ENST00000458992 160 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 MTND5P40-201ENST00000559945 246 ntBASIC3.04□□□□□ -1.92
HOXA2O43364 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA2O43364 Y_RNA.316-201ENST00000365118 111 ntBASIC3.03□□□□□ -1.92
HOXA2O43364 SNORA46-201ENST00000384762 135 ntBASIC3.03□□□□□ -1.92
HOXA2O43364 MIR524-201ENST00000385242 87 ntBASIC3.03□□□□□ -1.92
HOXA2O43364 RNU6-65P-201ENST00000516332 98 ntBASIC3.03□□□□□ -1.92
HOXA2O43364 AP001362.1-201ENST00000625165 124 ntBASIC3.03□□□□□ -1.92
HOXA2O43364 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA2O43364 RNU4-82P-201ENST00000362443 140 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 Y_RNA.173-201ENST00000363776 113 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 RNU6-776P-201ENST00000364403 104 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 RNU6-1022P-201ENST00000365049 104 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 RNU1-138P-201ENST00000384093 164 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 RNU6-480P-201ENST00000384332 107 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 RPL31P63-201ENST00000422565 375 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 AC073261.1-201ENST00000429409 121 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 AC011753.1-201ENST00000451001 220 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXA2O43364 AC012676.2-201ENST00000619258 186 ntBASIC3.02□□□□□ -1.93
HOXA2O43364 AC005336.3-201ENST00000623833 2679 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms