Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU7-45P-201ENST00000459460 63 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 AL353997.5-201ENST00000618886 171 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 AL596211.1-201ENST00000569873 2277 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PHGDHO43175 AC010332.2-201ENST00000613083 1904 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 MIR302B-201ENST00000362188 73 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 RNA5SP264-201ENST00000363115 107 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 Y_RNA.294-201ENST00000364916 102 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 RNU6-915P-201ENST00000364943 103 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 Y_RNA.454-201ENST00000384224 113 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 RNU6-913P-201ENST00000390913 95 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 SNORA67.5-201ENST00000391036 107 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 MTND4LP9-201ENST00000427694 174 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 AC091932.4-201ENST00000623386 200 ntBASIC1.47□□□□□ -2.17
PHGDHO43175 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
PHGDHO43175 Y_RNA.120-201ENST00000363304 110 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 MIR764-201ENST00000390811 85 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 RNU6-1190P-201ENST00000410811 104 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 RNU7-73P-201ENST00000458743 63 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 Y_RNA.651-201ENST00000459380 103 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 RNU5E-3P-201ENST00000515913 68 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 Y_RNA.690-201ENST00000516603 95 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.46□□□□□ -2.18
PHGDHO43175 MIR548AO-201ENST00000579992 96 ntBASIC1.46□□□□□ -2.18
PHGDHO43175 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PHGDHO43175 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 RNU1-133P-201ENST00000364867 167 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 SNORD18B-201ENST00000365659 72 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 MIR613-201ENST00000385248 95 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.45□□□□□ -2.18
PHGDHO43175 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 AP001328.1-201ENST00000528550 176 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
PHGDHO43175 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 RNU6-704P-201ENST00000364162 103 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 RNU6-910P-201ENST00000390844 107 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 Y_RNA.586-201ENST00000391146 98 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 HMGN1P33-201ENST00000432945 451 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 PRELID3BP2-201ENST00000605362 201 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 AL022345.2-201ENST00000606307 135 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 AP001340.1-201ENST00000624405 217 ntBASIC1.44□□□□□ -2.18
PHGDHO43175 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 AL603914.1-201ENST00000401964 204 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 AC090844.1-201ENST00000422019 156 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 AP003716.2-201ENST00000528260 108 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 MIR3121-201ENST00000579680 77 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.43□□□□□ -2.18
PHGDHO43175 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 AC091895.1-201ENST00000624494 256 ntBASIC1.43□□□□□ -2.18
PHGDHO43175 SNORA40-201ENST00000388090 126 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 MIR1302-7-201ENST00000408841 72 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 AP000942.3-201ENST00000603702 160 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 AC108081.1-201ENST00000604358 221 ntBASIC1.42□□□□□ -2.18
PHGDHO43175 RNU6-349P-201ENST00000362402 107 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 RNU4-16P-201ENST00000364737 141 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 SNORD50.2-201ENST00000365465 70 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 AL392103.1-201ENST00000447000 198 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 MIR8055-201ENST00000610739 97 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 AC011603.4-201ENST00000611325 277 ntBASIC1.41□□□□□ -2.18
PHGDHO43175 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 RNU6-396P-201ENST00000365369 105 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 SNORA80D-201ENST00000384488 135 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 MTATP6P21-201ENST00000440681 189 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 RNU6-1211P-201ENST00000459179 105 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 Y_RNA.692-201ENST00000516627 105 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 RNU6-971P-201ENST00000516920 106 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 AL020996.3-201ENST00000606617 222 ntBASIC1.4□□□□□ -2.19
PHGDHO43175 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 Y_RNA.114-201ENST00000363265 113 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 SNORA1.1-201ENST00000364671 133 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 SNORA26.6-201ENST00000391256 115 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 RNU6-240P-201ENST00000516098 97 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 MIR2115-201ENST00000516657 100 ntBASIC1.39□□□□□ -2.19
PHGDHO43175 AC019288.1-201ENST00000557918 224 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms