Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR4264-201ENST00000583520 66 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 AL365265.1-201ENST00000621045 234 ntBASIC0.88□□□□□ -2.27
NPHP1O15259 HSBP1P2-201ENST00000299671 229 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 RNU6-369P-201ENST00000362515 102 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 RNU6-888P-201ENST00000363010 101 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 Y_RNA.374-201ENST00000365606 101 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NPHP1O15259 RNU6-484P-201ENST00000384016 107 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 MIR616-201ENST00000385293 97 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 SNORA40.5-201ENST00000391061 128 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 RNU6-1299P-201ENST00000516316 100 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 SNORA18.4-201ENST00000516440 124 ntBASIC0.87□□□□□ -2.27
NPHP1O15259 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.86□□□□□ -2.27
NPHP1O15259 Y_RNA.30-201ENST00000362572 97 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 Y_RNA.66-201ENST00000362862 102 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 RNU6-1309P-201ENST00000363305 108 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 SNORD105-201ENST00000386910 85 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 SNRPGP8-201ENST00000454064 226 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 snoU13.21-201ENST00000459368 105 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 RNU6-504P-201ENST00000516568 104 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 RNU6-453P-201ENST00000516819 85 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 AC010487.4-201ENST00000637027 61 ntBASIC0.86□□□□□ -2.27
NPHP1O15259 RNU6-653P-201ENST00000363074 106 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 Y_RNA.634-201ENST00000364811 113 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 Y_RNA.416-201ENST00000384014 113 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 SNORA26-201ENST00000391286 122 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 AL606845.1-201ENST00000404881 255 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 AC244023.1-201ENST00000426884 112 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 RNU7-73P-201ENST00000458743 63 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 SNORD127-201ENST00000458892 86 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 RNU6-327P-201ENST00000516270 127 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 RNA5SP153-201ENST00000516498 76 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 RNU6-1270P-201ENST00000517128 108 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 AC242498.1-201ENST00000604134 111 ntBASIC0.85□□□□□ -2.27
NPHP1O15259 Y_RNA.91-201ENST00000363042 107 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 Y_RNA.133-201ENST00000363428 110 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 Y_RNA.277-201ENST00000364754 102 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 Y_RNA.432-201ENST00000384087 111 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 RNU6-1228P-201ENST00000391014 107 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 RNU6-381P-201ENST00000391259 108 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 RNU2-38P-201ENST00000410856 79 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 SCARNA15.1-201ENST00000516384 125 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 AC097639.2-201ENST00000603159 172 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 AC011921.3-201ENST00000605540 361 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 AC243829.3-201ENST00000622177 108 ntBASIC0.84□□□□□ -2.27
NPHP1O15259 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
NPHP1O15259 Y_RNA.76-201ENST00000362931 109 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 Y_RNA.288-201ENST00000364854 92 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 SNORA27-201ENST00000384323 126 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 Y_RNA.562-201ENST00000384695 113 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 RNU6-913P-201ENST00000390913 95 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 RNU2-70P-201ENST00000410718 179 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 Y_RNA.622-201ENST00000411091 108 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 MTND2P23-201ENST00000422990 651 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 MTCYBP9-201ENST00000431021 303 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 SNORD36C-201ENST00000516733 66 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 AL442067.1-201ENST00000613261 223 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 MIR5087-201ENST00000635826 76 ntBASIC0.83□□□□□ -2.28
NPHP1O15259 Y_RNA.54-201ENST00000362766 105 ntBASIC0.82□□□□□ -2.28
NPHP1O15259 MIR568-201ENST00000385036 95 ntBASIC0.82□□□□□ -2.28
NPHP1O15259 AF228730.3-201ENST00000436691 102 ntBASIC0.82□□□□□ -2.28
NPHP1O15259 RPS29P24-201ENST00000486345 171 ntBASIC0.82□□□□□ -2.28
NPHP1O15259 MIR8055-201ENST00000610739 97 ntBASIC0.82□□□□□ -2.28
NPHP1O15259 Y_RNA.262-201ENST00000364641 102 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 Y_RNA.292-201ENST00000364904 97 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 RNU6-934P-201ENST00000365154 107 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 Y_RNA.556-201ENST00000384677 113 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 MIR548H3-201ENST00000408771 118 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 SNORD83.1-201ENST00000411362 77 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.81□□□□□ -2.28
NPHP1O15259 RNU7-53P-201ENST00000516705 60 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 MIR4719-201ENST00000585233 84 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 MIR924-201ENST00000638017 53 ntBASIC0.81□□□□□ -2.28
NPHP1O15259 Y_RNA.115-201ENST00000363272 98 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 Y_RNA.162-201ENST00000363683 102 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 Y_RNA.199-201ENST00000364014 102 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 RNU4-17P-201ENST00000365598 141 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.8□□□□□ -2.28
NPHP1O15259 RNU7-62P-201ENST00000458856 62 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 RNU6-1045P-201ENST00000516321 107 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 RNU6-229P-201ENST00000516614 102 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 Z97988.1-201ENST00000637697 135 ntBASIC0.8□□□□□ -2.28
NPHP1O15259 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.79□□□□□ -2.28
NPHP1O15259 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NPHP1O15259 Y_RNA.410-201ENST00000383992 113 ntBASIC0.79□□□□□ -2.28
NPHP1O15259 MTND5P15-201ENST00000434246 349 ntBASIC0.79□□□□□ -2.28
NPHP1O15259 RNU6-561P-201ENST00000516222 102 ntBASIC0.79□□□□□ -2.28
NPHP1O15259 Y_RNA.668-201ENST00000516233 93 ntBASIC0.79□□□□□ -2.28
NPHP1O15259 MIR4711-201ENST00000578274 70 ntBASIC0.79□□□□□ -2.28
NPHP1O15259 Y_RNA.23-201ENST00000362496 106 ntBASIC0.78□□□□□ -2.28
NPHP1O15259 SNORD38B-201ENST00000384690 67 ntBASIC0.78□□□□□ -2.28
NPHP1O15259 MIR1302-3-201ENST00000408128 138 ntBASIC0.78□□□□□ -2.28
NPHP1O15259 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.78□□□□□ -2.28
NPHP1O15259 AC098934.3-201ENST00000430450 190 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms