Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 HAR1A.1-201ENST00000459583 118 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 RNU7-79P-201ENST00000516082 62 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 AL158211.2-201ENST00000607282 395 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 RNU6-429P-201ENST00000384582 108 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 RNU2-14P-201ENST00000411053 191 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 AC016907.1-201ENST00000419483 435 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.86□□□□□ -2.71
HMGN4O00479 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.86□□□□□ -2.71
HMGN4O00479 MIR548AG2-201ENST00000581228 64 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 AC112487.2-201ENST00000637950 304 ntBASIC-1.86□□□□□ -2.71
HMGN4O00479 RNU6-254P-201ENST00000363377 107 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 AL590004.1-201ENST00000405321 300 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 MIR1285-2-201ENST00000408311 88 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 SNX3P1X-201ENST00000414887 175 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 AL353813.1-201ENST00000440700 253 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 RNU6-470P-201ENST00000515954 104 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 AL121655.1-201ENST00000605811 308 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 AC098479.1-201ENST00000609225 154 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 AL138960.2-201ENST00000625145 535 ntBASIC-1.87□□□□□ -2.71
HMGN4O00479 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 SNORD37.1-201ENST00000390968 65 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 MIR8485-201ENST00000401372 91 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.88□□□□□ -2.71
HMGN4O00479 SNORD18.2-201ENST00000459604 70 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 RNA5SP401-201ENST00000515920 127 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 MIR1246-201ENST00000636535 73 ntBASIC-1.88□□□□□ -2.71
HMGN4O00479 SNORA22.1-201ENST00000362701 134 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 RNU4-20P-201ENST00000365601 151 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 RNU6-905P-201ENST00000384434 107 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 SNORA20-201ENST00000384662 132 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 RNU6-476P-201ENST00000384726 107 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 MIR652-201ENST00000385278 98 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 AC098826.2-201ENST00000452011 651 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 MIR5701-3-201ENST00000578890 82 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.89□□□□□ -2.71
HMGN4O00479 MIR5701-1-201ENST00000585138 82 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 MIR5701-2-201ENST00000615634 82 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 MIR6129-201ENST00000616087 109 ntBASIC-1.89□□□□□ -2.71
HMGN4O00479 RNU6-874P-201ENST00000362390 105 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 RNU6-297P-201ENST00000384636 107 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 SNORD2-201ENST00000459163 69 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 AL442663.2-201ENST00000554385 511 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
HMGN4O00479 PART1_1.1-201ENST00000611761 217 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 AC093783.1-201ENST00000612976 329 ntBASIC-1.9□□□□□ -2.71
HMGN4O00479 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 SNORD61-201ENST00000384252 73 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 MIR519A1-201ENST00000385257 85 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 RNU2-72P-201ENST00000411175 163 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 AF228730.3-201ENST00000436691 102 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 RNU6-479P-201ENST00000516348 105 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 RNU6-158P-201ENST00000517104 100 ntBASIC-1.91□□□□□ -2.72
HMGN4O00479 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 RNU6-888P-201ENST00000363010 101 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 SNORD113-6-201ENST00000363345 75 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 RNU4-70P-201ENST00000384579 139 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 MIR601-201ENST00000385256 79 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 SNORD42A-201ENST00000459584 64 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 MIR4770-201ENST00000579149 58 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 MIR4662B-201ENST00000579498 81 ntBASIC-1.92□□□□□ -2.72
HMGN4O00479 RNU6-588P-201ENST00000410281 105 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AL160004.2-201ENST00000432935 350 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AC091951.2-201ENST00000500762 203 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AC107027.2-201ENST00000512197 115 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 RNU7-35P-201ENST00000517174 62 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AC024933.1-201ENST00000608472 348 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AC027449.1-201ENST00000608890 407 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 AL157392.4-201ENST00000609756 345 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 MIR198-201ENST00000637333 62 ntBASIC-1.93□□□□□ -2.72
HMGN4O00479 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 SNORD114-17-201ENST00000364699 75 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 RNU6-248P-201ENST00000410720 107 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 AC083904.1-201ENST00000487828 231 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 AC005357.1-201ENST00000588399 301 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 U4.1-201ENST00000620349 87 ntBASIC-1.94□□□□□ -2.72
HMGN4O00479 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.95□□□□□ -2.72
HMGN4O00479 RNU6-524P-201ENST00000384270 107 ntBASIC-1.95□□□□□ -2.72
HMGN4O00479 RNU6-906P-201ENST00000384700 70 ntBASIC-1.95□□□□□ -2.72
HMGN4O00479 RNU7-80P-201ENST00000459562 61 ntBASIC-1.95□□□□□ -2.72
HMGN4O00479 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms