Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 MIR4264-201ENST00000583520 66 ntBASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 AC242498.1-201ENST00000604134 111 ntBASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
NPIPA3F8WFD2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6-934P-201ENST00000365154 107 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6-1189P-201ENST00000383958 107 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 SNORD38B-201ENST00000384690 67 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6-381P-201ENST00000391259 108 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 AL358176.2-201ENST00000425769 204 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU7-73P-201ENST00000458743 63 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 RNU6-561P-201ENST00000516222 102 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 AC133485.1-201ENST00000567176 124 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 AC104465.1-201ENST00000611365 139 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 SNORD38B-202ENST00000625943 69 ntBASIC0.7□□□□□ -2.3
NPIPA3F8WFD2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.76-201ENST00000362931 109 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 RNU6-653P-201ENST00000363074 106 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.262-201ENST00000364641 102 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.288-201ENST00000364854 92 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 RNU6-580P-201ENST00000365159 107 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 RNU4-17P-201ENST00000365598 141 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.518-201ENST00000384552 113 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 SNORD83.1-201ENST00000411362 77 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 HMGN1P33-201ENST00000432945 451 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 SNORD127-201ENST00000458892 86 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 RNU6-327P-201ENST00000516270 127 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 MIR8055-201ENST00000610739 97 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 AL442067.1-201ENST00000613261 223 ntBASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.69□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 RNU1-133P-201ENST00000364867 167 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.292-201ENST00000364904 97 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 SNORA1-201ENST00000384107 130 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 AC015818.7-201ENST00000428754 109 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 AC087499.7-201ENST00000441958 109 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 RNU7-62P-201ENST00000458856 62 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 RNU2-11P-201ENST00000459191 187 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
NPIPA3F8WFD2 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNU6-728P-201ENST00000365375 104 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNU6-342P-201ENST00000384521 104 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 SNORA79-201ENST00000408376 140 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNU7-96P-201ENST00000459535 64 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNY3P16-201ENST00000516338 101 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 RNA5SP480-201ENST00000516840 109 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 MIR4771-2-201ENST00000577758 74 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 MIR4771-1-201ENST00000582617 74 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 AC097639.2-201ENST00000603159 172 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 Z97988.1-201ENST00000637697 135 ntBASIC0.67□□□□□ -2.3
NPIPA3F8WFD2 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 SNORD77.3-201ENST00000391113 65 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 MIR548H3-201ENST00000408771 118 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 RNU6-1190P-201ENST00000410811 104 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 MTND2P23-201ENST00000422990 651 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 RNU6-998P-201ENST00000515894 101 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 RNU6-977P-201ENST00000516411 103 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 MIR3129-201ENST00000581095 76 ntBASIC0.66□□□□□ -2.3
NPIPA3F8WFD2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
NPIPA3F8WFD2 MIR302B-201ENST00000362188 73 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 SNORD27-201ENST00000363981 72 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.477-201ENST00000384352 108 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 MIR548I3-201ENST00000408378 149 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 AC011921.3-201ENST00000605540 361 ntBASIC0.65□□□□□ -2.31
NPIPA3F8WFD2 Y_RNA.65-201ENST00000362846 100 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 RNU6-103P-201ENST00000363686 107 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 MIR568-201ENST00000385036 95 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 RNU6-602P-201ENST00000411155 105 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 AC244098.3-201ENST00000424803 96 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 MTCYBP9-201ENST00000431021 303 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 AL121914.1-201ENST00000450188 156 ntBASIC0.64□□□□□ -2.31
NPIPA3F8WFD2 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms