Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 SNORD63.1-201ENST00000516178 80 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AC127455.1-201ENST00000565496 145 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AL080274.1-201ENST00000605565 220 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 MIR6874-201ENST00000635894 71 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 MIR548E-201ENST00000408287 88 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 MTND3P21-201ENST00000433774 331 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 GPR143P-201ENST00000434155 205 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AC022616.6-201ENST00000520479 119 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AL049861.1-201ENST00000603130 150 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AC080013.3-201ENST00000606839 578 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 AC087683.2-201ENST00000611384 326 ntBASIC-1.08□□□□□ -2.58
CNOT1A5YKK6 RNA5SP405-201ENST00000363059 114 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 RNU6-280P-201ENST00000364145 104 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 SNORA26.4-201ENST00000391188 123 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 EIF1P2-201ENST00000428233 350 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 AL353691.2-201ENST00000443795 59 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 MTND4LP25-201ENST00000570218 163 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 CPDP1-201ENST00000579660 283 ntBASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.09□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 RNU7-141P-201ENST00000459304 62 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 MIR3674-201ENST00000636576 68 ntBASIC-1.1□□□□□ -2.58
CNOT1A5YKK6 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 MTCYBP36-201ENST00000404146 440 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 RN7SKP299-201ENST00000606679 301 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 AC027449.1-201ENST00000608890 407 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 AL008718.3-201ENST00000610217 321 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 MIR548AY-201ENST00000617669 107 ntBASIC-1.1□□□□□ -2.59
CNOT1A5YKK6 MIR302B-201ENST00000362188 73 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 AL078595.1-201ENST00000404458 226 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 SNORA36B-201ENST00000410438 131 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 AC009961.2-201ENST00000435771 251 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 MTCO3P42-201ENST00000509488 518 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 MTCO3P39-201ENST00000514812 518 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNU6-803P-201ENST00000516034 102 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNU6-653P-201ENST00000363074 106 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNY3P9-201ENST00000384727 106 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 MTATP6P13-201ENST00000438531 667 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 TPTE2P5-203ENST00000458118 728 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNU6-551P-201ENST00000516661 103 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 MIR4756-201ENST00000577874 78 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 MIR5583-1-201ENST00000580941 59 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 AC005357.1-201ENST00000588399 301 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 AC245884.10-201ENST00000597355 337 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 AL357078.3-201ENST00000607528 618 ntBASIC-1.11□□□□□ -2.59
CNOT1A5YKK6 RNA5SP26-201ENST00000362406 119 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 ACA59.1-201ENST00000515966 143 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-720P-201ENST00000516363 108 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU7-53P-201ENST00000516705 60 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AC099654.13-201ENST00000639774 207 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-792P-201ENST00000363490 107 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-553P-201ENST00000364047 96 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 MIR487B-201ENST00000385021 84 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 MTCO2P30-201ENST00000503662 364 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 MTND4LP18-201ENST00000526864 291 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AC022878.1-201ENST00000530684 149 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AC098479.1-201ENST00000609225 154 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 AC104010.1-201ENST00000616889 150 ntBASIC-1.12□□□□□ -2.59
CNOT1A5YKK6 RNU6-433P-201ENST00000363216 104 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 RNU6-54P-201ENST00000365563 107 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 MIR1278-201ENST00000408753 81 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 RNU7-35P-201ENST00000517174 62 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 AP002795.1-201ENST00000534879 84 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 SNORD114-10-201ENST00000363409 72 ntBASIC-1.13□□□□□ -2.59
CNOT1A5YKK6 RNU6-704P-201ENST00000364162 103 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms