Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 Y_RNA.274-201ENST00000364714 101 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 MIR548I3-201ENST00000408378 149 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU2-11P-201ENST00000459191 187 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.81□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.8□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
TRBV4-1A0A0J9YWV2 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
TRBV4-1A0A0J9YWV2 AL138752.1-201ENST00000452964 351 ntBASIC0.8□□□□□ -2.28
TRBV4-1A0A0J9YWV2 MIR4431-201ENST00000579990 94 ntBASIC0.8□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 MIR624-201ENST00000385217 97 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-1190P-201ENST00000410811 104 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 HMGN1P33-201ENST00000432945 451 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 U7.7-201ENST00000459276 60 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU7-80P-201ENST00000459562 61 ntBASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.79□□□□□ -2.28
TRBV4-1A0A0J9YWV2 Y_RNA.140-201ENST00000363474 103 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 Y_RNA.233-201ENST00000364407 101 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-312P-201ENST00000364629 107 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORA1.1-201ENST00000364671 133 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-597P-201ENST00000365620 102 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORD38B-201ENST00000384690 67 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-205P-201ENST00000390858 107 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORA26.6-201ENST00000391256 115 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNA5SP127-201ENST00000411051 133 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-602P-201ENST00000411155 105 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SCARNA15-202ENST00000516881 127 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 AC078938.1-201ENST00000620993 318 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORD38B-202ENST00000625943 69 ntBASIC0.78□□□□□ -2.28
TRBV4-1A0A0J9YWV2 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.454-201ENST00000384224 113 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.552-201ENST00000384665 112 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR1827-201ENST00000408549 66 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.644-201ENST00000459006 113 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-1219P-201ENST00000516143 112 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.674-201ENST00000516362 113 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-388P-201ENST00000517012 105 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-389P-201ENST00000517048 105 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
TRBV4-1A0A0J9YWV2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR342-201ENST00000362212 99 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-369P-201ENST00000362515 102 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-200P-201ENST00000364743 107 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.297-201ENST00000364950 91 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC006461.1-201ENST00000412637 326 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 SEPT7P4-201ENST00000437076 306 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC072026.1-201ENST00000605023 201 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR302B-201ENST00000362188 73 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 SNORA25.7-201ENST00000364375 127 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU7-62P-201ENST00000458856 62 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 snoU13.21-201ENST00000459368 105 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC022559.1-201ENST00000520905 205 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR6740-201ENST00000618268 113 ntBASIC0.75□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.327-201ENST00000365201 102 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-747P-201ENST00000390928 104 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-241P-201ENST00000391148 104 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNA5SP261-201ENST00000410536 106 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU6-177P-201ENST00000411257 104 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 snoU13.2-201ENST00000459201 104 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 RNU7-45P-201ENST00000459460 63 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC113410.1-201ENST00000505029 247 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
TRBV4-1A0A0J9YWV2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms