Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SNORA72.4-201ENST00000384174 132 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-735P-201ENST00000410612 107 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 AC009161.1-201ENST00000417306 376 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 AC006210.1-201ENST00000424882 111 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RNA5SP484-201ENST00000458857 111 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 AC010655.3-201ENST00000478818 450 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RPS29P25-201ENST00000481709 171 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-120P-201ENST00000516077 103 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 TPTEP1-208ENST00000636884 213 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD24-201ENST00000383884 75 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 AL160004.2-201ENST00000432935 350 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 MTND3P10-201ENST00000450967 341 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-307P-201ENST00000516743 106 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 AC245008.1-201ENST00000608123 476 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 AC073869.9-201ENST00000641610 120 ntBASIC-0.66□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNY3P11-201ENST00000364153 102 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU4-84P-201ENST00000364200 139 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-865P-201ENST00000364772 107 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORD41.1-201ENST00000391000 69 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNA5SP261-201ENST00000410536 106 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 AC244505.6-201ENST00000452829 130 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 AC023449.1-201ENST00000454464 154 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-693P-201ENST00000516134 107 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORA25.13-201ENST00000516395 103 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 AP001328.1-201ENST00000528550 176 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 AL356055.1-201ENST00000602528 446 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 AL049861.1-201ENST00000603130 150 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.67□□□□□ -2.52
TRAV1-1A0A0B4J248 RNA5SP403-201ENST00000363598 108 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 RNY1P13-201ENST00000365030 105 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORD61-201ENST00000384252 73 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-383P-201ENST00000410864 94 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 MTATP6P17-201ENST00000431030 672 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 IGKV1-22-201ENST00000524313 326 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 DEFB131E-201ENST00000532329 154 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 RN7SKP299-201ENST00000606679 301 ntBASIC-0.68□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-144P-201ENST00000383951 107 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 AF228730.3-201ENST00000436691 102 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORD77.4-201ENST00000516158 81 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU7-188P-201ENST00000517063 64 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 AC109635.3-201ENST00000529536 185 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR4662B-201ENST00000579498 81 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR3611-201ENST00000584484 83 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 AC099654.14-201ENST00000638599 341 ntBASIC-0.69□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-888P-201ENST00000363010 101 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR626-201ENST00000385032 94 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-308P-201ENST00000390957 107 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 RPS3AP52-201ENST00000435639 297 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 MTND1P1-201ENST00000445453 368 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-911P-201ENST00000516523 104 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 RNA5SP66-201ENST00000517178 101 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 AC144568.1-201ENST00000520139 137 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR376A2-201ENST00000636782 80 ntBASIC-0.7□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 RNA5SP133-201ENST00000363368 119 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORA18-201ENST00000384416 132 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR548F5-201ENST00000408421 86 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU7-4P-201ENST00000516961 62 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR548AX-201ENST00000580117 73 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 MIR4473-201ENST00000583731 91 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 AC011373.1-201ENST00000607270 237 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 AC063944.3-201ENST00000609969 533 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 U6.92-201ENST00000636464 89 ntBASIC-0.71□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 RNU7-169P-201ENST00000459456 61 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 AC138305.3-201ENST00000624988 240 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 U6.109-201ENST00000636749 87 ntBASIC-0.72□□□□□ -2.52
TRAV1-1A0A0B4J248 SNORD114-14-201ENST00000362723 75 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 RNY4P14-201ENST00000363656 96 ntBASIC-0.73□□□□□ -2.53
TRAV1-1A0A0B4J248 RNU6-899P-201ENST00000363947 107 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms