Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 RNA5SP261-201ENST00000410536 106 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AF228730.3-201ENST00000436691 102 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 HSPE1P25-201ENST00000455484 251 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU7-152P-201ENST00000458982 64 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU7-45P-201ENST00000459460 63 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-848P-201ENST00000515948 107 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-617P-201ENST00000516147 107 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-473P-201ENST00000516164 107 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-397P-201ENST00000516226 104 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-504P-201ENST00000516568 104 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-765P-201ENST00000516916 99 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 U6atac.1-201ENST00000616025 117 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR376A1-201ENST00000616574 68 ntBASIC-0.19□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-716P-201ENST00000365621 103 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 U8.15-201ENST00000390947 134 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AP003733.2-201ENST00000529409 171 ntBASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.2□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU4-90P-201ENST00000362773 141 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-597P-201ENST00000365620 102 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 SNORD28-201ENST00000384706 75 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-291P-201ENST00000384720 107 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR613-201ENST00000385248 95 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 SNORA26-201ENST00000391286 122 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR4491-201ENST00000581087 68 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR4639-201ENST00000584938 69 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR499B-201ENST00000636498 73 ntBASIC-0.21□□□□□ -2.44
IGHV3-43A0A0B4J1X8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 SNORA2A-201ENST00000383885 135 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-535P-201ENST00000384722 107 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR215-201ENST00000384858 110 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 PMCHL1-202ENST00000423102 261 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 RNU6-976P-201ENST00000516086 111 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AC141846.1-201ENST00000568348 142 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AL132765.2-201ENST00000610812 351 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 AC244669.1-204ENST00000621564 178 ntBASIC-0.22□□□□□ -2.44
IGHV3-43A0A0B4J1X8 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU4-10P-201ENST00000364383 140 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6V-201ENST00000384105 107 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR526A2-201ENST00000390198 65 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RPL39P34-201ENST00000477141 156 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-507P-201ENST00000516045 100 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNA5SP330-201ENST00000517096 96 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MTND5P34-201ENST00000568888 325 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR4752-201ENST00000579672 72 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR4305-201ENST00000583252 102 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC006006.1-201ENST00000603082 144 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AL133255.1-201ENST00000606374 441 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC006157.1-201ENST00000611750 366 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC007485.1-201ENST00000616755 206 ntBASIC-0.23□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.24□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.24□□□□□ -2.45
IGHV3-43A0A0B4J1X8 SNORD19B-201ENST00000459623 84 ntBASIC-0.24□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.24□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC112487.2-201ENST00000637950 304 ntBASIC-0.24□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-514P-201ENST00000384208 107 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR548H2-201ENST00000408874 88 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 AC096949.1-201ENST00000412047 152 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MTND4LP30-201ENST00000454092 297 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-475P-201ENST00000516073 104 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-782P-201ENST00000516852 104 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 MIR2909-201ENST00000617113 69 ntBASIC-0.25□□□□□ -2.45
IGHV3-43A0A0B4J1X8 SNORA25.1-201ENST00000362326 128 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.26□□□□□ -2.45
IGHV3-43A0A0B4J1X8 RNU6-949P-201ENST00000384040 107 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms