Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.42□□□□□ -2.02
GTF3C3Q9Y5Q9 AL020996.3-201ENST00000606617 222 ntBASIC2.42□□□□□ -2.02
GTF3C3Q9Y5Q9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 RNY1P6-201ENST00000384193 109 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 SNORA80D-201ENST00000384488 135 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 SNORD38B-201ENST00000384690 67 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 RNU6-747P-201ENST00000390928 104 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 RNU6-241P-201ENST00000391148 104 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 RNU6-177P-201ENST00000411257 104 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 Y_RNA.757-201ENST00000578934 114 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 SNORD38B-202ENST00000625943 69 ntBASIC2.41□□□□□ -2.02
GTF3C3Q9Y5Q9 U8.1-201ENST00000362843 134 ntBASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 RNA5SP126-201ENST00000365092 109 ntBASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-913P-201ENST00000390913 95 ntBASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 AL591704.2-201ENST00000421658 181 ntBASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.4□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-125P-201ENST00000384505 107 ntBASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 RPS3AP1-201ENST00000413190 320 ntBASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 AL392103.1-201ENST00000447000 198 ntBASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 RPS29P23-201ENST00000458635 123 ntBASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 Z97988.1-201ENST00000637697 135 ntBASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GTF3C3Q9Y5Q9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-915P-201ENST00000364943 103 ntBASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 snoU13.25-201ENST00000458945 104 ntBASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 TUG1_4.1-201ENST00000619464 181 ntBASIC2.38□□□□□ -2.03
GTF3C3Q9Y5Q9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-910P-201ENST00000390844 107 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-460P-201ENST00000391158 108 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-346P-201ENST00000516288 111 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 MIR3133-201ENST00000583157 78 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 AP000753.3-201ENST00000604083 169 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 MIR6717-201ENST00000622747 73 ntBASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
GTF3C3Q9Y5Q9 AC010332.2-201ENST00000613083 1904 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 RNA5SP289-201ENST00000362332 137 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 SNORD12-201ENST00000391002 90 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 AL022345.2-201ENST00000606307 135 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 SEPT14P17-201ENST00000617978 177 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 AC021613.1-201ENST00000623880 111 ntBASIC2.36□□□□□ -2.03
GTF3C3Q9Y5Q9 SNORD50.2-201ENST00000365465 70 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 Y_RNA.430-201ENST00000384081 110 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 SNORD26-201ENST00000384147 75 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 MIR613-201ENST00000385248 95 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 MIR1185-1-201ENST00000408598 86 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.35□□□□□ -2.03
GTF3C3Q9Y5Q9 SNORA40-201ENST00000388090 126 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 MRPL35P3-201ENST00000421557 364 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU6-426P-201ENST00000516464 97 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 RNU2-60P-201ENST00000517290 128 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 MIR3618-201ENST00000580330 88 ntBASIC2.34□□□□□ -2.03
GTF3C3Q9Y5Q9 RNY1P11-201ENST00000363759 113 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-690P-201ENST00000365242 106 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR222-201ENST00000384992 110 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 MT-TN-201ENST00000387400 73 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 U7.2-201ENST00000607576 63 ntBASIC2.33□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-349P-201ENST00000362402 107 ntBASIC2.32□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-309P-201ENST00000364573 106 ntBASIC2.32□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR1302-7-201ENST00000408841 72 ntBASIC2.32□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR3121-201ENST00000579680 77 ntBASIC2.32□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR3162-201ENST00000581818 82 ntBASIC2.32□□□□□ -2.04
GTF3C3Q9Y5Q9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 SNORA25-201ENST00000384384 134 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-997P-201ENST00000384725 107 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU1-98P-201ENST00000458992 160 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 RPS29P11-201ENST00000496507 171 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU5E-3P-201ENST00000515913 68 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 SNORD79.1-201ENST00000516069 84 ntBASIC2.31□□□□□ -2.04
GTF3C3Q9Y5Q9 RNA5SP327-201ENST00000362494 101 ntBASIC2.3□□□□□ -2.04
GTF3C3Q9Y5Q9 SNORA26.6-201ENST00000391256 115 ntBASIC2.3□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU7-90P-201ENST00000459216 62 ntBASIC2.3□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR4264-201ENST00000583520 66 ntBASIC2.3□□□□□ -2.04
GTF3C3Q9Y5Q9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-774P-201ENST00000363238 107 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 SNORA25.8-201ENST00000364831 128 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU6-613P-201ENST00000410412 108 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 AC133485.4-201ENST00000561835 220 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 AC138907.4-201ENST00000570107 226 ntBASIC2.29□□□□□ -2.04
GTF3C3Q9Y5Q9 Y_RNA.330-201ENST00000365230 109 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 AL603908.1-201ENST00000406098 201 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 AL022718.1-201ENST00000412004 84 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 RNU7-21P-201ENST00000459430 62 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR3683-201ENST00000580847 82 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 AC091895.1-201ENST00000624494 256 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR6516-201ENST00000630554 81 ntBASIC2.28□□□□□ -2.04
GTF3C3Q9Y5Q9 MIR539-201ENST00000365690 78 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms