Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RNU6-772P-201ENST00000516042 105 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-958P-201ENST00000516995 106 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 AL137067.1-201ENST00000615933 120 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
PCDHA9Q9Y5H5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SNORD1A-201ENST00000364968 72 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SNORA51.10-201ENST00000384418 136 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SNORD41-201ENST00000386967 70 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 HSPE1P24-201ENST00000450782 238 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-240P-201ENST00000516098 97 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 AL359881.1-201ENST00000602916 267 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 MIR8063-201ENST00000621930 81 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 AC008133.2-201ENST00000624540 351 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHA9Q9Y5H5 SNORD58C-201ENST00000365223 64 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 Y_RNA.366-201ENST00000365540 102 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 RNA5SP261-201ENST00000410536 106 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-1061P-201ENST00000516530 99 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 MIR3683-201ENST00000580847 82 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 MIR3914-2-201ENST00000637339 95 ntBASIC1.93□□□□□ -2.1
PCDHA9Q9Y5H5 MIR570-201ENST00000384917 97 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 MIRLET7F2-201ENST00000385277 83 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-747P-201ENST00000390928 104 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-241P-201ENST00000391148 104 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNA5SP136-201ENST00000410906 107 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-177P-201ENST00000411257 104 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 SNORA31.4-201ENST00000516049 129 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-922P-201ENST00000516753 99 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 IGKV1-22-201ENST00000524313 326 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 MIR3152-201ENST00000579801 74 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 MIR4513-201ENST00000581077 86 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 U6.95-201ENST00000636931 70 ntBASIC1.92□□□□□ -2.1
PCDHA9Q9Y5H5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-834P-201ENST00000362367 110 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 RPL23AP94-201ENST00000512518 302 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 RNU6-781P-201ENST00000516377 101 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 AC021613.1-201ENST00000623880 111 ntBASIC1.91□□□□□ -2.1
PCDHA9Q9Y5H5 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.1
PCDHA9Q9Y5H5 Y_RNA.346-201ENST00000365385 112 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.629-201ENST00000411368 105 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6-893P-201ENST00000458841 100 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 AC021443.1-201ENST00000604478 211 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
PCDHA9Q9Y5H5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.273-201ENST00000364703 102 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.525-201ENST00000384570 113 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 MIR4305-201ENST00000583252 102 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 AC025166.1-201ENST00000612411 163 ntBASIC1.89□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6-1290P-201ENST00000362957 109 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 RNU6-913P-201ENST00000390913 95 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 HSPE1P19-201ENST00000603327 295 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 MIR8055-201ENST00000610739 97 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 MIR4251-201ENST00000635819 61 ntBASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
PCDHA9Q9Y5H5 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 SNORA26.6-201ENST00000391256 115 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 MIR1263-201ENST00000408324 86 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 Y_RNA.630-201ENST00000411370 108 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 COX6CP6-201ENST00000490840 228 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 MIR6717-201ENST00000622747 73 ntBASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHA9Q9Y5H5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms