Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHB4Q9Y5E5 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.213-201ENST00000364178 111 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.281-201ENST00000364774 94 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 SNORA1.2-201ENST00000365189 134 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-147P-201ENST00000383983 107 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 MT-TI-201ENST00000387365 69 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 RNU2-11P-201ENST00000459191 187 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 RNU2-35P-201ENST00000516446 142 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 MIR3613-201ENST00000579844 87 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 MIR3683-201ENST00000580847 82 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 AL035470.1-201ENST00000622571 220 ntBASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PCDHB4Q9Y5E5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.549-201ENST00000384657 102 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 SNORD12C-201ENST00000386307 89 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 SNORD28B-201ENST00000390993 75 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 SNORD123-201ENST00000459473 70 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 AC107297.1-201ENST00000459991 176 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 AC022523.2-201ENST00000561045 150 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 uc_338.28-201ENST00000612082 187 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDHB4Q9Y5E5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 MIR302B-201ENST00000362188 73 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.116-201ENST00000363292 103 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-1104P-201ENST00000384723 104 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-360P-201ENST00000390944 104 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-412P-201ENST00000516434 106 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 AC021613.1-201ENST00000623880 111 ntBASIC2.11□□□□□ -2.07
PCDHB4Q9Y5E5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 AC092881.1-201ENST00000638218 2733 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 Y_RNA.85-201ENST00000363014 111 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-203P-201ENST00000384038 104 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP144-201ENST00000410846 116 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNA5SP57-201ENST00000459463 123 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNU2-13P-201ENST00000515909 113 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 MIR548AR-201ENST00000582191 57 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 RNU6-1107P-201ENST00000364817 104 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 SNORA70.7-201ENST00000384159 133 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 RPS29P29-201ENST00000456396 171 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 RNU7-45P-201ENST00000459460 63 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 MIR4679-2-201ENST00000578358 77 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 FAM106DP-201ENST00000586416 501 ntBASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDHB4Q9Y5E5 RNY4P6-201ENST00000363667 96 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 Y_RNA.362-201ENST00000365518 110 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 SNORA24-201ENST00000384096 131 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-106P-201ENST00000384405 107 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 MIR759-201ENST00000390224 91 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 RNU7-67P-201ENST00000459003 62 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 AC106754.2-201ENST00000623006 233 ntBASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDHB4Q9Y5E5 MIR450A1-201ENST00000362262 91 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 SNORA63.5-201ENST00000363548 123 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 MIR194-1-201ENST00000384892 85 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-554P-201ENST00000410466 106 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-237P-201ENST00000515985 71 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU1-41P-201ENST00000516161 162 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-917P-201ENST00000516294 104 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU1-48P-201ENST00000516400 162 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-958P-201ENST00000516995 106 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.07□□□□□ -2.08
PCDHB4Q9Y5E5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 AL022718.1-201ENST00000412004 84 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 POLR2J4-204ENST00000418424 324 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 AL031737.1-201ENST00000450125 223 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 AC243994.1-201ENST00000618627 109 ntBASIC2.06□□□□□ -2.08
PCDHB4Q9Y5E5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms