Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.440-201ENST00000384120 114 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 MIR569-201ENST00000385228 96 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 SNX2P2-201ENST00000424553 323 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.703-201ENST00000516846 111 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 SCARNA15-202ENST00000516881 127 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 MIR4764-201ENST00000580680 88 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 MIR5197-201ENST00000583721 112 ntBASIC1.57□□□□□ -2.16
NKX1-2Q9UD57 MTND5P32-201ENST00000560711 1802 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.52-201ENST00000362760 96 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 SNORA1.2-201ENST00000365189 134 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 RNU6-42P-201ENST00000384165 107 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 SNORA27-201ENST00000384323 126 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.584-201ENST00000391090 114 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 RNU6-460P-201ENST00000391158 108 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 RNU6-947P-201ENST00000516264 106 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 RNU6-426P-201ENST00000516464 97 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
NKX1-2Q9UD57 MIR342-201ENST00000362212 99 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-34-201ENST00000362441 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-12-201ENST00000362583 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-29-201ENST00000362834 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 U8.1-201ENST00000362843 134 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-9-201ENST00000362912 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-21-201ENST00000362963 81 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-14-201ENST00000363090 81 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-13-201ENST00000363358 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-41-201ENST00000363608 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-11-201ENST00000363616 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-5-201ENST00000363633 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-39-201ENST00000363694 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-4-201ENST00000363810 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-16-201ENST00000363887 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-6-201ENST00000363942 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-42-201ENST00000364273 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-15-201ENST00000364809 81 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-1-201ENST00000364961 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-26-201ENST00000365067 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-10-201ENST00000365073 81 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.351-201ENST00000365436 96 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-43-201ENST00000365503 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-36-201ENST00000365629 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 AL603908.1-201ENST00000406098 201 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 RNU2-13P-201ENST00000515909 113 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 RNU7-43P-201ENST00000516554 64 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 RNU6-1149P-201ENST00000516810 97 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 SNORD115-40-201ENST00000606510 82 ntBASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NKX1-2Q9UD57 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 SNORD33-201ENST00000362761 85 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 RNU6-508P-201ENST00000363231 103 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 SNORD114-26-201ENST00000363543 72 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 AC107297.1-201ENST00000459991 176 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 RNU7-41P-201ENST00000515917 61 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 RNU6-958P-201ENST00000516995 106 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 RNU2-60P-201ENST00000517290 128 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 MIR3192-201ENST00000584920 77 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 MIR4791-201ENST00000607666 84 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 MIR6504-201ENST00000613520 61 ntBASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NKX1-2Q9UD57 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.343-201ENST00000365354 112 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 AL627390.1-201ENST00000396055 340 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 RNU7-67P-201ENST00000459003 62 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.686-201ENST00000516548 134 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 AL096861.1-201ENST00000610899 123 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 AC243994.1-201ENST00000618627 109 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NKX1-2Q9UD57 Y_RNA.420-201ENST00000384043 110 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 Y_RNA.568-201ENST00000384742 113 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 RPS29P24-201ENST00000486345 171 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 SNORD111.1-201ENST00000516421 86 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 AL512310.8-201ENST00000550183 120 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
NKX1-2Q9UD57 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.51□□□□□ -2.17
NKX1-2Q9UD57 Y_RNA.537-201ENST00000384626 109 ntBASIC1.51□□□□□ -2.17
NKX1-2Q9UD57 RNU6-1067P-201ENST00000384752 107 ntBASIC1.51□□□□□ -2.17
NKX1-2Q9UD57 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms