Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.11□□□□□ -2.07
PPARGC1AQ9UBK2 ICE2P2-201ENST00000483823 2787 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 MIR548A3-201ENST00000385297 97 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 SNORD123-201ENST00000459473 70 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 SNORD33.1-201ENST00000516213 88 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 RNU7-53P-201ENST00000516705 60 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 MTND5P18-201ENST00000445624 1801 ntBASIC2.1□□□□□ -2.07
PPARGC1AQ9UBK2 AL596211.1-201ENST00000569873 2277 ntBASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 AL035461.1-201ENST00000421490 332 ntBASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 SNORA74.3-201ENST00000517108 154 ntBASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 MTND5P34-201ENST00000568888 325 ntBASIC2.09□□□□□ -2.07
PPARGC1AQ9UBK2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PPARGC1AQ9UBK2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-203P-201ENST00000384038 104 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 MIR1263-201ENST00000408324 86 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 RPS29P29-201ENST00000456396 171 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 RNU7-43P-201ENST00000516554 64 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 SNORA44.1-201ENST00000517031 108 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 AL121890.5-201ENST00000620848 304 ntBASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PPARGC1AQ9UBK2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 MIR302B-201ENST00000362188 73 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.537-201ENST00000384626 109 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 MIR570-201ENST00000384917 97 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 MIR653-201ENST00000385279 96 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-893P-201ENST00000458841 100 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-322P-201ENST00000516010 103 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-589P-201ENST00000516485 107 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 FAM106DP-201ENST00000586416 501 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 AC021443.1-201ENST00000604478 211 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
PPARGC1AQ9UBK2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.494-201ENST00000384432 111 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-880P-201ENST00000384526 107 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 RNA5SP261-201ENST00000410536 106 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 RNU7-73P-201ENST00000458743 63 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.649-201ENST00000459077 103 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 RNU2-11P-201ENST00000459191 187 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.709-201ENST00000516952 92 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 MIR6715A-201ENST00000615929 79 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 MIR6129-201ENST00000616087 109 ntBASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.198-201ENST00000364013 98 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 Y_RNA.298-201ENST00000364960 107 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 SNORD116-21-201ENST00000384507 92 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-429P-201ENST00000384582 108 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 SNX2P2-201ENST00000424553 323 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-917P-201ENST00000516294 104 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 RNY4P20-201ENST00000516678 93 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 MIR3124-201ENST00000582636 67 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 MIR4305-201ENST00000583252 102 ntBASIC2.05□□□□□ -2.08
PPARGC1AQ9UBK2 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
PPARGC1AQ9UBK2 MIR1261-201ENST00000408659 82 ntBASIC2.04□□□□□ -2.08
PPARGC1AQ9UBK2 AC021613.1-201ENST00000623880 111 ntBASIC2.04□□□□□ -2.08
PPARGC1AQ9UBK2 MIR342-201ENST00000362212 99 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 MIR513A1-201ENST00000385138 129 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 MIR759-201ENST00000390224 91 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU7-67P-201ENST00000459003 62 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU7-164P-201ENST00000459221 62 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 SUMO2P16-201ENST00000519475 264 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 MIR3152-201ENST00000579801 74 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 MIR4791-201ENST00000607666 84 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 AC243994.1-201ENST00000618627 109 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
PPARGC1AQ9UBK2 RNU6-755P-201ENST00000364400 103 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 SNORD28B-201ENST00000390993 75 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 RNY4P18-201ENST00000391107 89 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 snoU13.16-201ENST00000459350 104 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 MIR4679-2-201ENST00000578358 77 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 MIR8074-201ENST00000615081 81 ntBASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.02□□□□□ -2.09
PPARGC1AQ9UBK2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 330.5 ms