Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 MIR578-201ENST00000384828 96 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AC005972.2-201ENST00000604690 348 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AC113618.1-201ENST00000416747 285 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AC093899.1-201ENST00000457984 376 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 TRAJ51-201ENST00000504127 63 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-430P-201ENST00000517078 107 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-685P-201ENST00000517088 95 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AP001542.1-201ENST00000591314 200 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-227P-201ENST00000362865 103 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 MIR216B-201ENST00000390186 82 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 SNORD19-201ENST00000391191 68 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 AC091133.4-201ENST00000511142 308 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-998P-201ENST00000515894 101 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-559P-201ENST00000516151 98 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 MIR4637-201ENST00000582405 84 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 TUSC7.1-201ENST00000610969 165 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.68□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 SNORA51.5-201ENST00000384126 131 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 RNU6-167P-201ENST00000384292 106 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 AC008507.2-201ENST00000588402 1176 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 RNU6-839P-201ENST00000363347 108 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 RNU6-824P-201ENST00000363724 104 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 SUMO2P5-201ENST00000506790 245 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 AC027807.2-201ENST00000616099 408 ntBASIC-1.69□□□□□ -2.68
CHD7Q9P2D1 SNORA27.1-201ENST00000362604 124 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 RNU6-102P-201ENST00000384485 104 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 MIR548E-201ENST00000408287 88 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 AC018710.1-201ENST00000506509 158 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 AL133153.1-201ENST00000557756 303 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 CPDP1-201ENST00000579660 283 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 MIR3146-201ENST00000580367 79 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 AL133215.3-201ENST00000609801 448 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 SNORD114-13-201ENST00000364377 74 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 RNU6-641P-201ENST00000384006 107 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 Z83846.1-201ENST00000446798 265 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 ACA59.1-201ENST00000515966 143 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 U6.109-201ENST00000636749 87 ntBASIC-1.7□□□□□ -2.68
CHD7Q9P2D1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-596P-201ENST00000365395 98 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 MTCYBP4-201ENST00000401524 249 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-77P-201ENST00000410554 91 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 AF228730.4-201ENST00000421457 183 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-522P-201ENST00000364497 107 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 MTND2P18-201ENST00000419962 1030 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-885P-201ENST00000516607 104 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNA5SP135-201ENST00000517019 125 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 FRG2DP-202ENST00000566967 323 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 SNORD77.3-201ENST00000391113 65 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 ELOCP4-201ENST00000420090 333 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 AC072039.2-201ENST00000608883 439 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 SNORA43.4-201ENST00000629559 138 ntBASIC-1.71□□□□□ -2.68
CHD7Q9P2D1 RNU6-694P-201ENST00000364071 147 ntBASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 RNU6-278P-201ENST00000390945 109 ntBASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 AC023449.1-201ENST00000454464 154 ntBASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 AC009878.1-201ENST00000621819 340 ntBASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 AC007671.2-201ENST00000637344 619 ntBASIC-1.72□□□□□ -2.68
CHD7Q9P2D1 FGF7P2-201ENST00000332473 296 ntBASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 RNU6-774P-201ENST00000363238 107 ntBASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 RNU6-207P-201ENST00000384137 107 ntBASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 AC124312.5-201ENST00000604451 268 ntBASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.72□□□□□ -2.69
CHD7Q9P2D1 RNU6-266P-201ENST00000364225 107 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 MTCO2P27-201ENST00000420740 428 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 SNORD11B-201ENST00000607707 90 ntBASIC-1.73□□□□□ -2.69
CHD7Q9P2D1 RNU4-75P-201ENST00000364621 146 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms