Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 RNU6-1234P-201ENST00000516877 103 ntBASIC1.73□□□□□ -2.13
VSX1Q9NZR4 RNU7-181P-201ENST00000517234 74 ntBASIC1.73□□□□□ -2.13
VSX1Q9NZR4 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
VSX1Q9NZR4 MIR3152-201ENST00000579801 74 ntBASIC1.73□□□□□ -2.13
VSX1Q9NZR4 MIR4435-1-201ENST00000582552 80 ntBASIC1.73□□□□□ -2.13
VSX1Q9NZR4 WWP1P1-201ENST00000466609 2769 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 RNA5SP259-201ENST00000365541 109 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 RN7SKP19-201ENST00000516016 252 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 AC015688.6-201ENST00000577737 104 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.72□□□□□ -2.13
VSX1Q9NZR4 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 MIR548AR-201ENST00000582191 57 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
VSX1Q9NZR4 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 AC091932.4-201ENST00000623386 200 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.72□□□□□ -2.13
VSX1Q9NZR4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VSX1Q9NZR4 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 RNU7-73P-201ENST00000458743 63 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 RNU7-67P-201ENST00000459003 62 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.71□□□□□ -2.14
VSX1Q9NZR4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 AL137067.1-201ENST00000615933 120 ntBASIC1.71□□□□□ -2.14
VSX1Q9NZR4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
VSX1Q9NZR4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VSX1Q9NZR4 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 RNU6-235P-201ENST00000362644 107 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 U8.2-201ENST00000363156 134 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 RNU6-690P-201ENST00000365242 106 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VSX1Q9NZR4 snoU13.16-201ENST00000459350 104 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 AC243994.1-201ENST00000618627 109 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 AC095038.3-201ENST00000634439 195 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 MIR3914-2-201ENST00000637339 95 ntBASIC1.7□□□□□ -2.14
VSX1Q9NZR4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.7□□□□□ -2.14
VSX1Q9NZR4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VSX1Q9NZR4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
VSX1Q9NZR4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VSX1Q9NZR4 AL596211.1-201ENST00000569873 2277 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 Y_RNA.261-201ENST00000364631 102 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 SNORD58C-201ENST00000365223 64 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 RNU6-772P-201ENST00000516042 105 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 MIR4764-201ENST00000580680 88 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 MIR4791-201ENST00000607666 84 ntBASIC1.69□□□□□ -2.14
VSX1Q9NZR4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
VSX1Q9NZR4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 SNORA51.10-201ENST00000384418 136 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 MIRLET7F2-201ENST00000385277 83 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 MIR759-201ENST00000390224 91 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-747P-201ENST00000390928 104 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-241P-201ENST00000391148 104 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-177P-201ENST00000411257 104 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU2-11P-201ENST00000459191 187 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 MIR4513-201ENST00000581077 86 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 AC106754.2-201ENST00000623006 233 ntBASIC1.68□□□□□ -2.14
VSX1Q9NZR4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
VSX1Q9NZR4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 AC003989.2-201ENST00000440224 169 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 RNU7-107P-201ENST00000459121 61 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 COX6CP6-201ENST00000490840 228 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 RNU6-958P-201ENST00000516995 106 ntBASIC1.67□□□□□ -2.14
VSX1Q9NZR4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 SNX2P2-201ENST00000424553 323 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
VSX1Q9NZR4 AC025166.1-201ENST00000612411 163 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
VSX1Q9NZR4 MIR342-201ENST00000362212 99 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RNU6-508P-201ENST00000363231 103 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RNA5SP48-201ENST00000363969 126 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 SNORD28B-201ENST00000390993 75 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RN7SL429P-201ENST00000479090 223 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RPL30P7-201ENST00000479312 323 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RN7SL489P-201ENST00000486185 223 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RN7SL327P-201ENST00000488659 223 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RNU6-240P-201ENST00000516098 97 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 MIR4305-201ENST00000583252 102 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 AC021443.1-201ENST00000604478 211 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 RN7SL853P-201ENST00000617250 223 ntBASIC1.65□□□□□ -2.15
VSX1Q9NZR4 AC021613.1-201ENST00000623880 111 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms