Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 Y_RNA.270-201ENST00000364693 104 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 MIR1302-7-201ENST00000408841 72 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 AL035398.1-201ENST00000430869 322 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 AC015712.3-201ENST00000559380 164 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 FTX_2.1-201ENST00000618816 94 ntBASIC1.29□□□□□ -2.2
LIN7CQ9NUP9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 MIR764-201ENST00000390811 85 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 AL392103.1-201ENST00000447000 198 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 RNU2-11P-201ENST00000459191 187 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 snoU13.16-201ENST00000459350 104 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 RNU7-96P-201ENST00000459535 64 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 RNU6-998P-201ENST00000515894 101 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 SNORD79.1-201ENST00000516069 84 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 RNU7-53P-201ENST00000516705 60 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 MIR4524B-201ENST00000581569 115 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 MIR3668-201ENST00000582138 75 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 AP000942.3-201ENST00000603702 160 ntBASIC1.28□□□□□ -2.2
LIN7CQ9NUP9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 RNU6-913P-201ENST00000390913 95 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 SNORD13-201ENST00000459299 104 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 RNU7-121P-201ENST00000516604 62 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 SNORD53B-201ENST00000577887 78 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 MIR6844-201ENST00000637122 62 ntBASIC1.27□□□□□ -2.21
LIN7CQ9NUP9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 RNU7-73P-201ENST00000458743 63 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 AC098479.1-201ENST00000609225 154 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 AC104465.1-201ENST00000611365 139 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 MIR3658-201ENST00000636291 56 ntBASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
LIN7CQ9NUP9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU6-886P-201ENST00000384319 105 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU6-482P-201ENST00000391068 107 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 PCNPP3-201ENST00000393579 471 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU7-80P-201ENST00000459562 61 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 SEPT14P17-201ENST00000617978 177 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 AL353997.5-201ENST00000618886 171 ntBASIC1.25□□□□□ -2.21
LIN7CQ9NUP9 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 RNU6-907P-201ENST00000390924 102 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 SNORD37.2-201ENST00000391075 66 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 SNORA75.5-201ENST00000391291 81 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 MIR1304-201ENST00000408243 91 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 RNU6-588P-201ENST00000410281 105 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 SCARNA15-202ENST00000516881 127 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 RNU11-2P-201ENST00000516898 142 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 AC091932.4-201ENST00000623386 200 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
LIN7CQ9NUP9 AL596211.1-201ENST00000569873 2277 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 AC008163.1-202ENST00000636004 2889 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 RNU6-654P-201ENST00000364373 107 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 RNU6-818P-201ENST00000364837 108 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 RNU6-396P-201ENST00000365369 105 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 SNORA67.6-201ENST00000391093 99 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 MIR548I3-201ENST00000408378 149 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 AC090844.1-201ENST00000422019 156 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 HMGN1P33-201ENST00000432945 451 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 RNU7-70P-201ENST00000516941 66 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 MIR3646-201ENST00000578301 84 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
LIN7CQ9NUP9 MTND5P32-201ENST00000560711 1802 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU6-394P-201ENST00000410735 107 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 AC063976.4-201ENST00000421971 163 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 MIR2115-201ENST00000516657 100 ntBASIC1.22□□□□□ -2.21
LIN7CQ9NUP9 SNORA31.24-201ENST00000517232 57 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms