Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SNORD68-201ENST00000363214 84 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 SNORD115-18-201ENST00000363293 82 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 Y_RNA.242-201ENST00000364473 110 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 SNORD115-17-201ENST00000364612 82 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 Y_RNA.351-201ENST00000365436 96 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 Y_RNA.360-201ENST00000365512 102 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 AL451046.2-201ENST00000403074 277 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 AL512326.2-201ENST00000426359 151 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 AL049830.1-201ENST00000468034 425 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 RNU6-267P-201ENST00000516714 103 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 RNU7-70P-201ENST00000516941 66 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 MIR4694-201ENST00000578534 80 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 MIR4777-201ENST00000583710 86 ntBASIC2.25□□□□□ -2.05
VPS11Q9H270 RNU6-363P-201ENST00000362895 105 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 RNU6-832P-201ENST00000363319 107 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 RNU6-979P-201ENST00000383896 107 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 MIR605-201ENST00000385078 83 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 RNA5SP144-201ENST00000410846 116 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 AL606517.2-201ENST00000442855 241 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 RPS23P4-201ENST00000487908 423 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 Y_RNA.714-201ENST00000517065 90 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 AP002004.2-201ENST00000531656 154 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 MIR3162-201ENST00000581818 82 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 MIR4672-201ENST00000583126 81 ntBASIC2.24□□□□□ -2.05
VPS11Q9H270 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VPS11Q9H270 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS11Q9H270 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS11Q9H270 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS11Q9H270 RNU6-661P-201ENST00000362409 107 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 Y_RNA.190-201ENST00000363964 101 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 SNORD14E-201ENST00000364009 85 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 RNU6-1019P-201ENST00000364424 107 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 MIR802-201ENST00000390235 94 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 RNU6-279P-201ENST00000391297 101 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 RNU6-402P-201ENST00000410678 103 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 RNA5SP100-201ENST00000410903 110 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 RNA5SP59-201ENST00000410922 110 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 TRBV12-1-201ENST00000479785 344 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 SNORD45.4-201ENST00000516629 73 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 SNORA18.7-201ENST00000516910 131 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 AC024995.1-201ENST00000523014 93 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 IGLL4P-201ENST00000614590 133 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 ICE2P2-201ENST00000483823 2787 ntBASIC2.23□□□□□ -2.05
VPS11Q9H270 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS11Q9H270 RNU6-219P-201ENST00000364728 107 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 Y_RNA.313-201ENST00000365095 103 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 RNU6-301P-201ENST00000384277 107 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 Y_RNA.494-201ENST00000384432 111 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 RNU6-679P-201ENST00000391003 106 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 AC069257.2-201ENST00000441819 155 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 MIR1270-201ENST00000459320 83 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 RNU1-142P-201ENST00000516682 145 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS11Q9H270 AC004812.1-201ENST00000540773 146 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS11Q9H270 MIR4299-201ENST00000577899 72 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 MIR5588-201ENST00000581890 63 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS11Q9H270 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
VPS11Q9H270 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
VPS11Q9H270 RNU4-67P-201ENST00000364569 141 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 SNORD115-35-201ENST00000365122 82 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 Y_RNA.507-201ENST00000384500 99 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 SNORA11.2-201ENST00000408318 127 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 RN7SKP200-201ENST00000410564 320 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 RNU6-733P-201ENST00000410759 104 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 POLR2J4-204ENST00000418424 324 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 SNX2P2-201ENST00000424553 323 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS11Q9H270 AL163195.1-201ENST00000496941 348 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 RPL23AP94-201ENST00000512518 302 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 RNU6-1258P-201ENST00000516911 111 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
VPS11Q9H270 MIR449A-201ENST00000362113 91 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 MIR342-201ENST00000362212 99 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 RNU6-1084P-201ENST00000362498 107 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 SNORD115-13-201ENST00000363358 82 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 RNU6-112P-201ENST00000363599 104 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 Y_RNA.155-201ENST00000363632 101 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 SNORD115-16-201ENST00000363887 82 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 RNU6-60P-201ENST00000364792 103 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 SNORD115-1-201ENST00000364961 82 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 snoU2-30.1-201ENST00000365012 70 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 AC087499.4-201ENST00000448505 178 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 RNU7-80P-201ENST00000459562 61 ntBASIC2.2□□□□□ -2.06
VPS11Q9H270 RNU6-857P-201ENST00000515893 110 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms