Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AL008987.1-201ENST00000415528 237 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 MTND4P3-201ENST00000417829 541 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AC084290.1-201ENST00000434995 374 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 RNU7-67P-201ENST00000459003 62 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AC010598.1-201ENST00000510378 103 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AL118558.2-201ENST00000556294 238 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AC007012.1-201ENST00000567192 175 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 MIR4473-201ENST00000583731 91 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AL049861.1-201ENST00000603130 150 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 AC145423.2-201ENST00000610631 239 ntBASIC-1.09□□□□□ -2.58
SPTBN4Q9H254 RNU6-766P-201ENST00000362478 107 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 SNORA18-201ENST00000384416 132 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-291P-201ENST00000384720 107 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 MIR548I3-201ENST00000408378 149 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-329P-201ENST00000459618 107 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 SNORD115-34-201ENST00000362441 82 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 SNORD74.6-201ENST00000364796 70 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-407P-201ENST00000365280 104 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-800P-201ENST00000384473 103 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 MIR320C1-201ENST00000408566 88 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU4-55P-201ENST00000410731 137 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 ELOCP17-201ENST00000414751 326 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 TIMM9P2-201ENST00000419324 266 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 snoU13.6-201ENST00000458785 104 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 AC011373.1-201ENST00000607270 237 ntBASIC-1.1□□□□□ -2.59
SPTBN4Q9H254 RNU6-227P-201ENST00000362865 103 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR558-201ENST00000384920 94 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MTATP6P18-201ENST00000417994 673 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 USP9YP30-201ENST00000430729 455 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MTND1P5-201ENST00000517906 940 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 AC107934.1-201ENST00000522215 217 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR4789-201ENST00000577469 82 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 PART1_1.1-201ENST00000611761 217 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 AP001282.2-201ENST00000616149 309 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR539-201ENST00000365690 78 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 SNORD12C-201ENST00000386307 89 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 SNORA26.4-201ENST00000391188 123 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 RNU2-29P-201ENST00000410423 189 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MTND1P24-201ENST00000552175 861 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 AL117187.1-201ENST00000555482 181 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR3912-201ENST00000577566 105 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR4308-201ENST00000580634 81 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 MIR4464-201ENST00000580818 92 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 SNORD11B-201ENST00000607707 90 ntBASIC-1.11□□□□□ -2.59
SPTBN4Q9H254 RNU4-92P-201ENST00000363783 136 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 RNU6-827P-201ENST00000365553 106 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 AL137792.2-201ENST00000443484 235 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 MTCO3P42-201ENST00000509488 518 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 MTCO3P39-201ENST00000514812 518 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 SNORA40.17-201ENST00000517256 115 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 AC120024.2-201ENST00000576526 175 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 RMST_3.1-201ENST00000611651 109 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 RNU6-136P-201ENST00000384663 107 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 MIR652-201ENST00000385278 98 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 RNU2-9P-201ENST00000410194 145 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 AC069503.3-201ENST00000618674 145 ntBASIC-1.12□□□□□ -2.59
SPTBN4Q9H254 RNY3P3-201ENST00000363816 102 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 MTND2P18-201ENST00000419962 1030 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 RNU6-958P-201ENST00000516995 106 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AL359920.1-201ENST00000618332 176 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 RNU6-571P-201ENST00000384128 107 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 RNU6-481P-201ENST00000384194 107 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 SNORA72.6-201ENST00000384520 129 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 RNA5SP237-201ENST00000410414 113 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 SNORD2-201ENST00000459163 69 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AC115989.2-201ENST00000578640 563 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 YWHAEP2-201ENST00000580066 112 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AC069545.1-201ENST00000605671 358 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AC107905.1-201ENST00000616204 426 ntBASIC-1.13□□□□□ -2.59
SPTBN4Q9H254 AC073343.1-201ENST00000328239 651 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-563P-201ENST00000364872 108 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-737P-201ENST00000365370 107 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-449P-201ENST00000383914 107 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU7-74P-201ENST00000459104 62 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 SNORA25.14-201ENST00000516481 132 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 SNORD113-3-201ENST00000364830 72 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-673P-201ENST00000365084 104 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 SNORA69-201ENST00000383895 132 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 AL353691.2-201ENST00000443795 59 ntBASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.14□□□□□ -2.59
SPTBN4Q9H254 MIR548AY-201ENST00000617669 107 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms