Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
KRTAP4-1Q9BYQ7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-1Q9BYQ7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORD115-14-201ENST00000363090 81 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-1244P-201ENST00000363614 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-743P-201ENST00000364151 106 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA1.1-201ENST00000364671 133 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA14A-201ENST00000364773 135 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.332-201ENST00000365271 113 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-622P-201ENST00000384272 103 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.532-201ENST00000384590 113 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR586-201ENST00000385035 97 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR520G-201ENST00000385064 90 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR520H-201ENST00000385126 88 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR548B-201ENST00000385247 97 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-808P-201ENST00000391233 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNA5SP354-201ENST00000391247 136 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORD30.1-201ENST00000391309 70 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR208B-201ENST00000401172 77 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-613P-201ENST00000410412 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-712P-201ENST00000410558 100 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC110620.1-201ENST00000416042 228 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC090844.1-201ENST00000422019 156 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RPL31P63-201ENST00000422565 375 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC092047.1-201ENST00000424997 240 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNRPGP13-201ENST00000442212 177 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 ATP5J2P3-201ENST00000451550 258 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 IFNWP4-201ENST00000453148 294 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC145146.1-201ENST00000496370 254 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC010598.1-201ENST00000510378 103 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MRPS17P9-201ENST00000511924 393 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNA5SP480-201ENST00000516840 109 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR3923-201ENST00000579521 83 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC090897.2-201ENST00000581715 130 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC103810.7-201ENST00000607821 91 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 PCGEM1.1-201ENST00000613431 131 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC006435.5-201ENST00000624486 112 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC095038.3-201ENST00000634439 195 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC103706.3-201ENST00000636297 85 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORD98-201ENST00000636377 67 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 U2.21-201ENST00000637295 81 ntBASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-1Q9BYQ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 AL596028.1-201ENST00000326971 197 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 DEFB108F-201ENST00000344638 222 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-600P-201ENST00000362524 99 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA63.2-201ENST00000362603 126 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORD115-39-201ENST00000363694 82 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-829P-201ENST00000363700 112 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-461P-201ENST00000364195 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-1163P-201ENST00000364516 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNA5SP117-201ENST00000365294 118 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA2.2-201ENST00000365473 135 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR633-201ENST00000384821 98 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-663P-201ENST00000391105 106 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA40.6-201ENST00000391153 128 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR1250-201ENST00000408098 113 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR1236-201ENST00000408340 102 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNORA7.5-201ENST00000410672 110 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 AC074348.1-201ENST00000426503 132 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNRPEP9-201ENST00000436794 238 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 AL450471.1-201ENST00000447509 127 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU7-80P-201ENST00000459562 61 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 SNRPGP7-201ENST00000469016 106 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 FGF7P7-201ENST00000514120 227 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNA5SP20-201ENST00000515976 84 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-693P-201ENST00000516134 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-70P-201ENST00000516438 60 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU6-807P-201ENST00000516805 107 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU1-117P-201ENST00000517041 158 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RN7SKP234-201ENST00000517173 224 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 RNU7-156P-201ENST00000517214 74 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 Y_RNA.722-201ENST00000517279 114 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR3921-201ENST00000577308 85 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR4778-201ENST00000577635 80 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR4511-201ENST00000582784 87 ntBASIC0.69□□□□□ -2.3
KRTAP4-1Q9BYQ7 MIR5006-201ENST00000583027 110 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms