Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 RN7SKP88-201ENST00000516847 250 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AC108706.1-201ENST00000611053 297 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 7SK.8-201ENST00000612110 250 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AL391903.3-201ENST00000612158 163 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 7SK.11-201ENST00000615477 250 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 AC015726.2-201ENST00000620112 122 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
RSPO3Q9BXY4 MIR411-201ENST00000362239 96 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.200-201ENST00000364018 102 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.489-201ENST00000384410 101 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 RNU6-578P-201ENST00000390980 103 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 MIR548O-201ENST00000408583 114 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 AC023449.1-201ENST00000454464 154 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 RPS26P48-201ENST00000491713 339 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 RNU6-322P-201ENST00000516010 103 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 RNU6-693P-201ENST00000516134 107 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 AP003716.2-201ENST00000528260 108 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 MIR4764-201ENST00000580680 88 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 MIR4744-201ENST00000581563 82 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 AC141273.2-201ENST00000618989 130 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 AC027335.2-201ENST00000624030 375 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 U6.106-201ENST00000636360 105 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 MIR376A2-201ENST00000636782 80 ntBASIC0.73□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.83-201ENST00000363005 113 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNA5SP457-201ENST00000363657 124 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 SNORA1-201ENST00000384107 130 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNY3P5-201ENST00000384127 102 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 SNORD38C-201ENST00000384381 69 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.571-201ENST00000384753 98 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 MIR520C-201ENST00000385005 87 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 MIR802-201ENST00000390235 94 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 MIR1302-7-201ENST00000408841 72 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.618-201ENST00000410949 107 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU2-55P-201ENST00000411146 174 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 AF228730.3-201ENST00000436691 102 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU2-13P-201ENST00000515909 113 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 AC109810.1-201ENST00000534066 224 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 AC097639.2-201ENST00000603159 172 ntBASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
RSPO3Q9BXY4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 RNU6-888P-201ENST00000363010 101 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 SNORD24-201ENST00000383884 75 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 RNU6-138P-201ENST00000515952 107 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 SNORA31.2-201ENST00000516019 134 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 RNA5SP436-201ENST00000516020 115 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 SNORD36C-201ENST00000516733 66 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 MIR4662B-201ENST00000579498 81 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
RSPO3Q9BXY4 RNU6-103P-201ENST00000363686 107 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.182-201ENST00000363880 111 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 SNORD115-28-201ENST00000363931 81 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.297-201ENST00000364950 91 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 SNORD77.3-201ENST00000391113 65 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 MIR1185-1-201ENST00000408598 86 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 RNU4-43P-201ENST00000410628 137 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 AC245047.7-201ENST00000440265 293 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 AL121914.1-201ENST00000450188 156 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 SNORA31.4-201ENST00000516049 129 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 RNU6-1219P-201ENST00000516143 112 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 SNORD111.1-201ENST00000516421 86 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 RNA5SP153-201ENST00000516498 76 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 RNU6-197P-201ENST00000516680 100 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 RNU6-365P-201ENST00000517113 106 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU6-978P-201ENST00000364371 103 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 RNU6-728P-201ENST00000365375 104 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.69□□□□□ -2.3
RSPO3Q9BXY4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms