Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MIR215-201ENST00000384858 110 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 RNU4-30P-201ENST00000410245 143 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 RNA5SP237-201ENST00000410414 113 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 RNU7-96P-201ENST00000459535 64 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 MIR4639-201ENST00000584938 69 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 AL049861.1-201ENST00000603130 150 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 AC099654.14-201ENST00000638599 341 ntBASIC-0.3□□□□□ -2.46
UPK3BQ9BT76 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 RNU4-80P-201ENST00000363200 141 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 RNY3-201ENST00000365484 102 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 RNU6-308P-201ENST00000390957 107 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 AL160004.2-201ENST00000432935 350 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 MTND4P17-201ENST00000470444 350 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 RNU6-718P-201ENST00000516166 105 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 SNORD36C-201ENST00000516733 66 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 AC133104.2-201ENST00000615272 193 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 AP001282.2-201ENST00000616149 309 ntBASIC-0.31□□□□□ -2.46
UPK3BQ9BT76 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNU6-269P-201ENST00000391077 97 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNA5SP261-201ENST00000410536 106 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNU6-383P-201ENST00000410864 94 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNU6-998P-201ENST00000515894 101 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNU6-504P-201ENST00000516568 104 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RNU6-765P-201ENST00000516916 99 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 AC138869.1-201ENST00000568623 124 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 RPS29P30-201ENST00000600975 111 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.32□□□□□ -2.46
UPK3BQ9BT76 MIR302B-201ENST00000362188 73 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 SNORD24-201ENST00000383884 75 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 RNU6-937P-201ENST00000384325 106 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 MIR548H2-201ENST00000408874 88 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 SEPT14P8-201ENST00000508026 178 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 RNU6-358P-201ENST00000516564 75 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 RNU6-126P-201ENST00000516685 103 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 RNU2-31P-201ENST00000516954 155 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 RNU6-365P-201ENST00000517113 106 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 AC100767.1-201ENST00000528178 123 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 MIR4752-201ENST00000579672 72 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 MIR4645-201ENST00000583158 77 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 AL121655.1-201ENST00000605811 308 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 AL021707.8-201ENST00000609428 183 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 AL662814.1-201ENST00000617364 121 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 AC244669.1-204ENST00000621564 178 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 MIR6717-201ENST00000622747 73 ntBASIC-0.33□□□□□ -2.46
UPK3BQ9BT76 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 MIR342-201ENST00000362212 99 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-756P-201ENST00000383997 107 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 SNORD61-201ENST00000384252 73 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 SNORA72.6-201ENST00000384520 129 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-535P-201ENST00000384722 107 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 U8.15-201ENST00000390947 134 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 MIR548F1-201ENST00000408667 84 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 MIR1912-201ENST00000410389 80 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU7-165P-201ENST00000458864 60 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 SNORD77.4-201ENST00000516158 81 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-699P-201ENST00000517081 110 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 MIR4491-201ENST00000581087 68 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 AC025253.1-201ENST00000613623 543 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.34□□□□□ -2.46
UPK3BQ9BT76 RNU6-845P-201ENST00000362578 103 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 RNU6-623P-201ENST00000363143 105 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 RNU6-291P-201ENST00000384720 107 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 RNU6-191P-201ENST00000516295 94 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 MIR3152-201ENST00000579801 74 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 SNORD113-5-201ENST00000607261 78 ntBASIC-0.35□□□□□ -2.47
UPK3BQ9BT76 MIR367-201ENST00000362299 68 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 RNU6-653P-201ENST00000363074 106 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 MIR559-201ENST00000385188 96 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 U8.20-201ENST00000459445 131 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 AC010655.3-201ENST00000478818 450 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.36□□□□□ -2.47
UPK3BQ9BT76 SNORD116.3-201ENST00000517176 78 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms